| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0906 |
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| Symbol | |
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| ID | 6115140 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 1207443 |
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| End bp | 1210070 |
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| Gene Length | 2628 bp |
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| Protein Length | 875 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641632390 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001759295 |
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| Protein GI | 170725269 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTAC TACAAGCATT GCCAAGTCTA TGCGCAGTGG CTGTGTCAGC CGTTTACGCT
CCAAATATAA TGGCAGCCGA TGAAGAAGTT GAACGAATAG AGGTAACAGG TTCACATATT
AAACGTACAG ATATGGAGGG GCCATCACCG GTTACCTCTA TTTCTGAAGA GGATATTAGT
AACTCTGGTG CCACGGATTT AATCGGGCTT TTCTCTAAAC TTCCTATTTC AGGCCAAGGT
ACTTTCTCAA CACAAGCAAA TAGCAGTGAT GACACCGCCA ATGGTGGCTC AAGTGTTTCA
TTACGCGGAT TAGGCGCTGA TTCCACATTG ATACTTGTTA ATGGAAGACG AGTATCTGTT
AGTCCATTTG CAAAAGGGAT CGATACCGCT TTTGTTGATA TTAATAATAT TCCAGTCTCG
GCCATTAAAC GTGTTGATAT TTTAAAAGAT GGCGCTTCAG CAACTTATGG TTCTGATGCC
ATTGCGGGCG TGATTAATAT TATTCTAAGG GATGATATTG ATGGCGCTGA AATAACCGCA
AGAATAGGTG ATACCTCTGC AGGAGGTGGT AAAGAGGAGA GTGCGAGTCT AGTTTGGGGA
AGCCATACAG AAAAGAGCAG TCACACCTTT ATTCTAGATT ATTTTAATCG TGAGGAGCTG
CTTTATGGAG ATCGAGATTA CTCCAAATCG GCCAATCAGT CGGCATTAAG GCCAAATGAT
CCTTTTGCTA AAAGTTTCCG GAGTTCTTCT GGGATACCTG GAACAATTGA ATTAGCTGTA
CGTCCAGAAG ATCCAGAAAA AGTTTTTCGT TTACCAGACA CCTTTGGGAA TGATGTTTGT
GCACCTGAAG ATATAGACTC TGTGGATAAC ATATGCCGAT ATGATTATGC TCCTGTTATG
ACCATGGTTC CAGAGAATAA GCGTTTTAGC GTTAACTATA TGGGTAAATA TGATATTACC
GATAATGTTA GTGGTTTCCT TGAGTTTAAC GGACAAAGCT CAAAAACGAC GGTAAAAGGT
GCCGGTAGCC CAAGCTTTAA TGAGCTGTTT ATGTCTGCCG ATAATCCAAA TCACCCATTT
GCTGATATGC CAACCCATGA GTTTTATAAT CAAGATTTAA CCATGCGCCG ACGTATGGTA
GATATTGGCA ATCGCTTAAA AGAGGTCGAA TCTGATTATT ATCGTACGGT TATTGGCCTT
AATGGCCAGT TTGGTGAGTG GGATTGGGAG ACAGCGTTTA GTTATATCAA CAGTAAATCG
GTGGAGCGCG GTATTGATGG CTTCCCTAAC TCTCGTCGCG CCCAGGAAGC GATTGATAAC
GGCAGTTGGA ATCCGTTTGA ACCTTCTACA AATACGCAAG AGGCGTTAGA TTTTATCGAG
ACCACTACCA ATCGTGTAGG CGAGTCGACC AACCGTTCAC TCGATGCAAA ATTGTCAGGC
CCTCTGCTTG AGATGCCTGC GGGTGAGCTT ATGGTGGCGT TTGGTATTGA GTATCGTGAA
GAGACTATCA GTGACAATCC CGATGATCAG TTCTTGCGCG GTGAGGTATT TGGAACCGAG
GCGACCCAAG CGAATGGAGA GCGTGATAAT ACCGCGTTTT ATGCCGAGTT AGGTGTGCCG
GTATTTGAAT CACTGGAGCT ACAGTTAGCC CTTCGTCATG AGGATTACAG TGACTTTGGT
ACAACAACCG ACCCTAAGGT GTCGTTTCTT TGGTCACCAC TGGAAGATCT CTCTTTTAGG
GGCTCATGGG GTACGGCATT TAGGGCGCCC TCTTTGGCTC AATTAGGCTT AGGGAGGACG
GATGAGTCTC CATCACTTGT TGATACCGTG CGATGTGATG CAGTGGGAAA CATTAATAAA
GCCTGTGAAG TTCAAGAATA TACAGCAGTG TTTGAGGGGA ATCCGGACTT AGGACCGGAA
GAGTCCACAA GTTATAACTT AGGGGTTATC TATAACATTA CCGATAATTT AAATTTCTCA
TTAGATTATT ATAGTTATGA TATTGAAAAT ATTATCGATT CAGATACTCA GTTTGTTTTC
AGTAACTTTG GTGATGATCC TAATGTTGTT GAGCGTCTGC CATCAGCGAT CCCAAATGAT
CCTGGTGAGG TGGTGACCAT CTATGATTCA TTCCAGAATA TTGGCGACTT AGTGACCACT
GGTTTAGATC TGGATGCCAA TTTCCTGCTT GAAACCGGTG CTGGCGAATT TAAGTTTAGC
TATGCATTGA ACTATATGCT GAAATATGAA GATAAGCGTC CTGACTCGGA TGGTGGACAG
AGGATCAATA TTGTAGAGGG AGATTTTGAG CAGCCTGAAG CACGTTGGAC TGCCGGTGTC
GATTGGACAA TTACTGATTT TAGATCTTAC CTAGGTCTAA ATTATATTGG TGAGTTTAAG
CAGAAAGAAG CGGTCCAAAA AGACGGGATG CCTGATATTG ATGCCATGAT GACGGTTGAT
GCATCGGTTA ACTACTATGG GTTACCCGAT ACTGTGCTGA CATTGGGGGC GACCAATCTA
CTTGATGAAG AGCCACCTTT CTCCTATCAC GACTTTATGG GGTATGTGAC CTCAGTACAC
AGTGGTCAAG GGAGATTTGT TTATCTACAG GCGAGCTACA GCTTTTAA
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| Protein sequence | MKLLQALPSL CAVAVSAVYA PNIMAADEEV ERIEVTGSHI KRTDMEGPSP VTSISEEDIS
NSGATDLIGL FSKLPISGQG TFSTQANSSD DTANGGSSVS LRGLGADSTL ILVNGRRVSV
SPFAKGIDTA FVDINNIPVS AIKRVDILKD GASATYGSDA IAGVINIILR DDIDGAEITA
RIGDTSAGGG KEESASLVWG SHTEKSSHTF ILDYFNREEL LYGDRDYSKS ANQSALRPND
PFAKSFRSSS GIPGTIELAV RPEDPEKVFR LPDTFGNDVC APEDIDSVDN ICRYDYAPVM
TMVPENKRFS VNYMGKYDIT DNVSGFLEFN GQSSKTTVKG AGSPSFNELF MSADNPNHPF
ADMPTHEFYN QDLTMRRRMV DIGNRLKEVE SDYYRTVIGL NGQFGEWDWE TAFSYINSKS
VERGIDGFPN SRRAQEAIDN GSWNPFEPST NTQEALDFIE TTTNRVGEST NRSLDAKLSG
PLLEMPAGEL MVAFGIEYRE ETISDNPDDQ FLRGEVFGTE ATQANGERDN TAFYAELGVP
VFESLELQLA LRHEDYSDFG TTTDPKVSFL WSPLEDLSFR GSWGTAFRAP SLAQLGLGRT
DESPSLVDTV RCDAVGNINK ACEVQEYTAV FEGNPDLGPE ESTSYNLGVI YNITDNLNFS
LDYYSYDIEN IIDSDTQFVF SNFGDDPNVV ERLPSAIPND PGEVVTIYDS FQNIGDLVTT
GLDLDANFLL ETGAGEFKFS YALNYMLKYE DKRPDSDGGQ RINIVEGDFE QPEARWTAGV
DWTITDFRSY LGLNYIGEFK QKEAVQKDGM PDIDAMMTVD ASVNYYGLPD TVLTLGATNL
LDEEPPFSYH DFMGYVTSVH SGQGRFVYLQ ASYSF
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