Gene Swoo_0897 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0897 
Symbol 
ID6115131 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp1195380 
End bp1197104 
Gene Length1725 bp 
Protein Length574 aa 
Translation table11 
GC content50% 
IMG OID641632381 
Productsingle-stranded-DNA-specific exonuclease RecJ 
Protein accessionYP_001759286 
Protein GI170725260 
COG category[L] Replication, recombination and repair 
COG ID[COG0608] Single-stranded DNA-specific exonuclease 
TIGRFAM ID[TIGR00644] single-stranded-DNA-specific exonuclease RecJ 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCCATA AGATTGTTCG CCGCCCTAGA GTCGATGATA CTCACCTTCC CGAAACCCTC 
TCTCCACTCC TAAAGCAGAT ATATGCCAGT CGTGGCAGCA CGGCGGCAGA TTGTGATTTG
GCCCTAAAGC GGTTACTTCG CCCCGATACC ATGATGGGAT TGCCTCGTGC GGCAGAGATC
ATTGCGGATG CCATTATGGC TCAGCGCTCT ATTCTGATCA TGGGGGATTT TGATGCCGAT
GGTGCAACTT CCACTTGTGT GTGTTTACTT GCACTTAAGA TGATGGGGGC GACGCGGGTC
GACTACCTGA TCCCAAATCG ATTTGATTTT GGTTACGGCT TAAGTCCCGA GATAGTCGCT
GTAGCACAGG ATAAGGGCGC CGAGTTACTG ATCACCGTCG ATAATGGCAT CTCCTCAATT
GAGGGGGTAG AAGCGGCGAA ATCTCTGGGG ATGCAAGTGG TTATCACCGA CCATCACCTT
CCTGGGAAAA CCATTCCCAA CGCCGATGCT ATCGTCAACC CAAACCAAGT CGATTGCAGC
TTTGCTAGTA AATCAATTGC AGGGGTTGGG GTTGCCTTCT ATCTTATGTC CGCGTTAAGA
GCAGAGTTAA GATCGCGTAA CTGGTATCAA GAGCAGGGGA TCGCTGAGCC AAATTTAGCT
CAGTTACTGG ATATTGTTGC CTTAGGTACA GTGGCTGATG TGGTTGCATT AGATGGCAAT
AACCGAATCT TAGTCGAAGC TGGGTTGCAA CGGGTTCGCG CAGGAAGGTG TCGACCTGGG
ATCACGGCAT TGTTAGAGGT GGCTAAGCGT AATCCATCTA GAATCGTGGC TTCTGATTTT
GGCTTTGCGG TTGGGCCTAG GTTAAATGCG GCGGGCCGAC TCGATGAGAT GTCATTGGGG
GTCGAAACCC TATTATGTGA TGACATGATG ACTGCCAGAC GTATGGCGTC AGAGCTAGAT
GGCCTGAACG CTGAGCGACG GGATCTTGAA GCTGATATGC AGCAGGAAGC TTTAAAGAGT
TTAGAGAAAT TAGAGCTTAA TGAAGCTGAG CTTCCTTGGG GGATAGCCCT GTTTAAGGAG
GATTGGCACC AAGGAGTCAT AGGAATTTTA GCCTCGCGCA TTAAGGACAG GTATCATCGA
CCTGTTATTG CGTTTGCCGA TGCGGGCAAT GGAGAGATAA AGGGCTCTGC ACGTTCGATT
AAAGGTCTGC ATATGCGGGA TCTGTTAGAG CTGATTAATA GCAGACACCC TGGGATGATC
CTTAAGTTTG GTGGTCATGC CATGGCAGCT GGCCTCTCCC TGTTAGAGAA AGACTTTTAT
AAGTTTGAAC AGGCTTATGA TGAAGGGGTA AGAGAGCTGC TAAAGCCTGA GCAGTTAACC
GGTGAGATGA CCACCGATGG CGAGCTGACA CCCGATGAGA TGACCTTACC TATGGCTTGG
GAGCTAAGGA ATGCAGGCCC ATGGGGCCAA GAGTTCCCTG AGCCTCTGTT TGATGGTTAT
TTTAAAGTGG TGCAGCAGCG TATCGTTGGT GAGAAGCACC TCAAGCTTGT ACTGGAAACC
GAGTGTGGCA AGCTTATGCT TGACGGTATC GCCTTTAACG TCGATATGAC CACTTGGCCG
GATGCCACCA TTGAGCATGC TCGTGTTGTG TATAAGCTCG ATGTTAACGA GTTTAGGGGT
AATCAAACAT TGCAGTTGAT GGTAGATCAA ATAGAGGCAA TGTAG
 
Protein sequence
MIHKIVRRPR VDDTHLPETL SPLLKQIYAS RGSTAADCDL ALKRLLRPDT MMGLPRAAEI 
IADAIMAQRS ILIMGDFDAD GATSTCVCLL ALKMMGATRV DYLIPNRFDF GYGLSPEIVA
VAQDKGAELL ITVDNGISSI EGVEAAKSLG MQVVITDHHL PGKTIPNADA IVNPNQVDCS
FASKSIAGVG VAFYLMSALR AELRSRNWYQ EQGIAEPNLA QLLDIVALGT VADVVALDGN
NRILVEAGLQ RVRAGRCRPG ITALLEVAKR NPSRIVASDF GFAVGPRLNA AGRLDEMSLG
VETLLCDDMM TARRMASELD GLNAERRDLE ADMQQEALKS LEKLELNEAE LPWGIALFKE
DWHQGVIGIL ASRIKDRYHR PVIAFADAGN GEIKGSARSI KGLHMRDLLE LINSRHPGMI
LKFGGHAMAA GLSLLEKDFY KFEQAYDEGV RELLKPEQLT GEMTTDGELT PDEMTLPMAW
ELRNAGPWGQ EFPEPLFDGY FKVVQQRIVG EKHLKLVLET ECGKLMLDGI AFNVDMTTWP
DATIEHARVV YKLDVNEFRG NQTLQLMVDQ IEAM