Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_0897 |
Symbol | |
ID | 6115131 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 1195380 |
End bp | 1197104 |
Gene Length | 1725 bp |
Protein Length | 574 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641632381 |
Product | single-stranded-DNA-specific exonuclease RecJ |
Protein accession | YP_001759286 |
Protein GI | 170725260 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATCCATA AGATTGTTCG CCGCCCTAGA GTCGATGATA CTCACCTTCC CGAAACCCTC TCTCCACTCC TAAAGCAGAT ATATGCCAGT CGTGGCAGCA CGGCGGCAGA TTGTGATTTG GCCCTAAAGC GGTTACTTCG CCCCGATACC ATGATGGGAT TGCCTCGTGC GGCAGAGATC ATTGCGGATG CCATTATGGC TCAGCGCTCT ATTCTGATCA TGGGGGATTT TGATGCCGAT GGTGCAACTT CCACTTGTGT GTGTTTACTT GCACTTAAGA TGATGGGGGC GACGCGGGTC GACTACCTGA TCCCAAATCG ATTTGATTTT GGTTACGGCT TAAGTCCCGA GATAGTCGCT GTAGCACAGG ATAAGGGCGC CGAGTTACTG ATCACCGTCG ATAATGGCAT CTCCTCAATT GAGGGGGTAG AAGCGGCGAA ATCTCTGGGG ATGCAAGTGG TTATCACCGA CCATCACCTT CCTGGGAAAA CCATTCCCAA CGCCGATGCT ATCGTCAACC CAAACCAAGT CGATTGCAGC TTTGCTAGTA AATCAATTGC AGGGGTTGGG GTTGCCTTCT ATCTTATGTC CGCGTTAAGA GCAGAGTTAA GATCGCGTAA CTGGTATCAA GAGCAGGGGA TCGCTGAGCC AAATTTAGCT CAGTTACTGG ATATTGTTGC CTTAGGTACA GTGGCTGATG TGGTTGCATT AGATGGCAAT AACCGAATCT TAGTCGAAGC TGGGTTGCAA CGGGTTCGCG CAGGAAGGTG TCGACCTGGG ATCACGGCAT TGTTAGAGGT GGCTAAGCGT AATCCATCTA GAATCGTGGC TTCTGATTTT GGCTTTGCGG TTGGGCCTAG GTTAAATGCG GCGGGCCGAC TCGATGAGAT GTCATTGGGG GTCGAAACCC TATTATGTGA TGACATGATG ACTGCCAGAC GTATGGCGTC AGAGCTAGAT GGCCTGAACG CTGAGCGACG GGATCTTGAA GCTGATATGC AGCAGGAAGC TTTAAAGAGT TTAGAGAAAT TAGAGCTTAA TGAAGCTGAG CTTCCTTGGG GGATAGCCCT GTTTAAGGAG GATTGGCACC AAGGAGTCAT AGGAATTTTA GCCTCGCGCA TTAAGGACAG GTATCATCGA CCTGTTATTG CGTTTGCCGA TGCGGGCAAT GGAGAGATAA AGGGCTCTGC ACGTTCGATT AAAGGTCTGC ATATGCGGGA TCTGTTAGAG CTGATTAATA GCAGACACCC TGGGATGATC CTTAAGTTTG GTGGTCATGC CATGGCAGCT GGCCTCTCCC TGTTAGAGAA AGACTTTTAT AAGTTTGAAC AGGCTTATGA TGAAGGGGTA AGAGAGCTGC TAAAGCCTGA GCAGTTAACC GGTGAGATGA CCACCGATGG CGAGCTGACA CCCGATGAGA TGACCTTACC TATGGCTTGG GAGCTAAGGA ATGCAGGCCC ATGGGGCCAA GAGTTCCCTG AGCCTCTGTT TGATGGTTAT TTTAAAGTGG TGCAGCAGCG TATCGTTGGT GAGAAGCACC TCAAGCTTGT ACTGGAAACC GAGTGTGGCA AGCTTATGCT TGACGGTATC GCCTTTAACG TCGATATGAC CACTTGGCCG GATGCCACCA TTGAGCATGC TCGTGTTGTG TATAAGCTCG ATGTTAACGA GTTTAGGGGT AATCAAACAT TGCAGTTGAT GGTAGATCAA ATAGAGGCAA TGTAG
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Protein sequence | MIHKIVRRPR VDDTHLPETL SPLLKQIYAS RGSTAADCDL ALKRLLRPDT MMGLPRAAEI IADAIMAQRS ILIMGDFDAD GATSTCVCLL ALKMMGATRV DYLIPNRFDF GYGLSPEIVA VAQDKGAELL ITVDNGISSI EGVEAAKSLG MQVVITDHHL PGKTIPNADA IVNPNQVDCS FASKSIAGVG VAFYLMSALR AELRSRNWYQ EQGIAEPNLA QLLDIVALGT VADVVALDGN NRILVEAGLQ RVRAGRCRPG ITALLEVAKR NPSRIVASDF GFAVGPRLNA AGRLDEMSLG VETLLCDDMM TARRMASELD GLNAERRDLE ADMQQEALKS LEKLELNEAE LPWGIALFKE DWHQGVIGIL ASRIKDRYHR PVIAFADAGN GEIKGSARSI KGLHMRDLLE LINSRHPGMI LKFGGHAMAA GLSLLEKDFY KFEQAYDEGV RELLKPEQLT GEMTTDGELT PDEMTLPMAW ELRNAGPWGQ EFPEPLFDGY FKVVQQRIVG EKHLKLVLET ECGKLMLDGI AFNVDMTTWP DATIEHARVV YKLDVNEFRG NQTLQLMVDQ IEAM
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