Gene Swoo_0896 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0896 
Symbol 
ID6115130 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp1194512 
End bp1195240 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content46% 
IMG OID641632380 
Productthiol:disulfide interchange protein DsbC 
Protein accessionYP_001759285 
Protein GI170725259 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1651] Protein-disulfide isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTTTA CCCGAGTATG CACCCTGATT TTTGCTGTAT TGTTGGCTCA ATCTGCGATT 
GCTGCCCCCA ATACACCGAC AGACGATAGC AAGGCTTTAA AAGAGAAGCT AGCTGATACG
TTAAGTGTAA AAGTTCACTC TCTTCAGGAG TCTCCAATCC CTGGTTTATA TGAAGCATTA
ACCGATCGCG GTGTGCTTTA TATCTCCAAA GATGGCTCTA AACTGTTTCA CGGTAATCTT
TACGATCTCG ATAAAGGGAT GAAGAACCTG ACTGAGGCGG CGATGGCGGG CCCTCGAATT
GAGATGATGA AGCCTCTTGA AGATAATATG TTGGTCTACA AGGCTAAAAA CGAGAAGCAC
GTGGTTACAG TGTTCACCGA TACCACCTGT GGTTACTGCC GTAAGCTACA TAACGAGATG
CAGGAGTATA ATGATCTAGG TATTACTATT CGTTATCTCG CTTTCCCTCG TCGTGGCATA
CCTTCGGCAA ATGCCGATGA GATGGAATCA ATATGGTGTG CTGCCGATCC ACTTCAAGCC
ATGACAGATG CAAAAGGCGG TAAGAGCGTC AAACAGGAGA AGTGCGATGC GAAAATTGCG
GAGCAGTACA ACCTAGGCCA AAGCTTTGGT GTTAATGGTA CCCCTGCAAT TGTGCTAGAA
GATGGCAGCA TGATCCCTGG CTACCAACCA CCAGCTGCAC TGCTTAAAGT GCTTGAAGCG
ACTAACTAA
 
Protein sequence
MIFTRVCTLI FAVLLAQSAI AAPNTPTDDS KALKEKLADT LSVKVHSLQE SPIPGLYEAL 
TDRGVLYISK DGSKLFHGNL YDLDKGMKNL TEAAMAGPRI EMMKPLEDNM LVYKAKNEKH
VVTVFTDTTC GYCRKLHNEM QEYNDLGITI RYLAFPRRGI PSANADEMES IWCAADPLQA
MTDAKGGKSV KQEKCDAKIA EQYNLGQSFG VNGTPAIVLE DGSMIPGYQP PAALLKVLEA
TN