Gene Swoo_0860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0860 
Symbol 
ID6115094 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp1152175 
End bp1153218 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content50% 
IMG OID641632344 
Productaldo/keto reductase 
Protein accessionYP_001759249 
Protein GI170725223 
COG category[C] Energy production and conversion 
COG ID[COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATATC GTCGACTACC ACATTCCAAC CTTGAAGTGA GCGAACTCTG TTTAGGCACC 
ATGACTTGGG GTGAGCAGAA CACCCAATCA GAAGCATTTT CCCAGCTTGA CTACGCCATC
GGCCAAGGCA TCAATTTTAT TGATACTGCC GAGATGTATC CAGTCCCACC AAAAGCTGAA
ACACAAGGCG CCACCGAGCG CATCTTAGGT AACTACCTCA AAAAAGCAGG CAATCGCGAT
AACTTAGTCA TCGCCACTAA AGTCGCTGCA CCAGGGGGAA AGGGTGACTA TATACGCCCC
AATATGGCCC TAGACTGGCG TAACCTCCAT GAAGCGGTCG ACTCCTCACT TGAGCGCTTA
CAGATAGATA CCATCGATCT CTATCAGGTA CATTGGCCCG ACAGAAACAC CAACTTTTTC
GGCGAGCTCT CCTACCAGCA GATTGATGAG AACGAGAAAC TCACTCCCAT CATAGATACA
TTGGAAGCCC TAGCCGCATT GCAAAAAGAG GGCAAGATCC GCTATATCGG TGTCTCGAAC
GAAACGCCTT GGGGCCTAAT GAAATACCTG CAACTTGCAG AGAAGCATAA CCTCCCCCGC
GTAGTCTCAG TACAGAATCC CTATAACTTG CTCAATCGCA GCTTTGAAGT GGGAATGGCC
GAGATAAGCC ACCGTGAAGA GGTGCCGCTA CTTGCCTACT CACCATTAGC ATTCGGTGCT
CTCAGTGGTA AGTATTTAGA TGACCAATGG CCAGAAGGGG CGCGTCTCAC CCTCTTTAAA
CGCTTTGCTC GTTATACTGG CTCACAAGTC GCTCTCGATG CCACCAAAGC CTATGTCGAG
CTGGCCCGCG AGTTCAAGCT CAGTCCAGCG CAGATGTCAT TGGCTTTTGT CAATTCTCGT
AAATTTGTGG GTTCAAACAT CATAGGGGCC ACCAACCTTG AACAGCTCAA GGAGAATATC
GACAGCATCA ACACCAGCAT CTCACCTGAG TTGATGGCGC GACTCGATGA GTTAGCCCAG
GTTTACCGCC TGCCCTGCCC ATAA
 
Protein sequence
MEYRRLPHSN LEVSELCLGT MTWGEQNTQS EAFSQLDYAI GQGINFIDTA EMYPVPPKAE 
TQGATERILG NYLKKAGNRD NLVIATKVAA PGGKGDYIRP NMALDWRNLH EAVDSSLERL
QIDTIDLYQV HWPDRNTNFF GELSYQQIDE NEKLTPIIDT LEALAALQKE GKIRYIGVSN
ETPWGLMKYL QLAEKHNLPR VVSVQNPYNL LNRSFEVGMA EISHREEVPL LAYSPLAFGA
LSGKYLDDQW PEGARLTLFK RFARYTGSQV ALDATKAYVE LAREFKLSPA QMSLAFVNSR
KFVGSNIIGA TNLEQLKENI DSINTSISPE LMARLDELAQ VYRLPCP