Gene Swoo_0843 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0843 
Symbol 
ID6115077 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp1131128 
End bp1132309 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content50% 
IMG OID641632328 
Producthypothetical protein 
Protein accessionYP_001759233 
Protein GI170725207 
COG category[R] General function prediction only 
COG ID[COG4637] Predicted ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGACCA CTCTAGCCAT TCAAAATTAC CGCTCCCTAC GTGAGATCCG CGTTCCACTG 
GAGCGGCTCA ATCTGGTCAC AGGAGCCAAT GGCAGCGGTA AGTCTAACCT CTATAAAGCC
CTTCGATTAC TTGCACAAAC CGCACAAGGG GGCGTGGTCA ATGCACTGGC TTTAGAGGGA
GGACTGGATT CCAGTTTCTG GGCTGGGCCT GAGACCATCA GCAAAGGGAT GCGCAGTGGT
GAGACGCCAA TTGAGCCGAC TGTTCGCCAA CACGCTAAGC GCTTAAAACT GGGGTTTGCC
AGTGACGAGT ACAGTTACCT TATTGAACTT GGCTTGCCTA AACCTGACTC CACCACTCTG
TTTGGTTTAG ATCCGCAAGT GAAACGTGAG GCTATCTGGG TCGGCAATCG ATACCGCCCA
GCATCGGTAT TAGTTGAAAG GCGTGGACCC TTAGTCAAAA GCCGCGCTGA ACAGAATAAG
CAAGCTGGCT GGGAAACCTT AAATCTGCAT ATGCAGCACG GTGATAGCAT CTTTACTGAG
CTTGCAGATC CTGAGCGAAC ACCTGAGGTG ATAAAACTGC GTGATAGTAT TCGCGCCTGG
CGCTTCTACG ATCACTTTCG TAGTGACAGT GATGCCCCTG CACGTAAAGC TCAGCTGGGC
ACCCGAACAC CTGTATTGCA TCATGACGGC CGCGATCTAG CTTCAGCGAT TCAAACCATC
TTTGAGGTAG GTGATAAACA GGGATTCAAT GAAGCGGTCA GCGACGCCTT TCCTGGAGCC
CGAGTTCATA TTGGATATGA ATCCAATGGC ATGTTAACGG TTCAATTTCA TCAAGAGGGA
TTACTCAGGC CATTAAACGC GGCAGAGTTA TCCGATGGCA CCTTAAGATA CCTATTGCTG
GTAGCAGCAC TACTAACCCC AAGACCCCCA GAGTTAATGG TCTTAAATGA GCCAGAAACC
AGCTTACACC CATATCTGTT GCCAGCGCTT TCACGTCTTA TAGCCAAAGC CTCTGAGCAT
TGTCAGCTCT GGGTCGTCTC CCACGCCAAT CGGCTTATCA ATGCACTTAA TGAGTTCGAA
CACTGCAACT TAATTGAACT GGATAAGCAG TTAGGTCAGA CTGAAATTCT CGGACAAGAT
ATCTTAACCA CGCCCAGTTG GCATTGGCAG AGTCGCTCAT AA
 
Protein sequence
MLTTLAIQNY RSLREIRVPL ERLNLVTGAN GSGKSNLYKA LRLLAQTAQG GVVNALALEG 
GLDSSFWAGP ETISKGMRSG ETPIEPTVRQ HAKRLKLGFA SDEYSYLIEL GLPKPDSTTL
FGLDPQVKRE AIWVGNRYRP ASVLVERRGP LVKSRAEQNK QAGWETLNLH MQHGDSIFTE
LADPERTPEV IKLRDSIRAW RFYDHFRSDS DAPARKAQLG TRTPVLHHDG RDLASAIQTI
FEVGDKQGFN EAVSDAFPGA RVHIGYESNG MLTVQFHQEG LLRPLNAAEL SDGTLRYLLL
VAALLTPRPP ELMVLNEPET SLHPYLLPAL SRLIAKASEH CQLWVVSHAN RLINALNEFE
HCNLIELDKQ LGQTEILGQD ILTTPSWHWQ SRS