Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_0786 |
Symbol | |
ID | 6115020 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 1066698 |
End bp | 1067693 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641632271 |
Product | phospholipase A(2) |
Protein accession | YP_001759176 |
Protein GI | 170725150 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2829] Outer membrane phospholipase A |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000253748 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAGCC AAAGCACAAT ACATCTATCG CTCTCACTCT TAGCTCTGCT TCCCACATTT TTTATCTCGT CATCTGTGTA TGCCCACGAT CTGAAAAACC ATGAGACCCA TCATGAAGAA AAGACTGTAG CAACGGCTAA AGAGGACAAC ACAAAGACCA TTGAAAGAGA ACACAATAAC TCATTAGTTG ATGAACGTGT GCATGATGAA CTGGCAACCT CGGAGCTTCC TTTCGTGATG ACTCCCCATA ACGTTAACTA CATTTTGCCA GCAACCTATA ACACCAGCCC CAACATGGCC CCTTTCGAGG AGGAAGCCAA AGAGCACCCC TTCGACCTGG ATAATATGGA AGCAAAATTT CAGATAAGCT TTAAATTTCC CTTAATGTAT AACGTCTTCG GAGATAATGG TCATCTCTTC GTCGCCTACA CAAACCAATC CTACTGGCAG GTCTACAACA AGGATATCTC ATCACCGTTT CGTGAAACTA ACCATGAGCC AGAGATATTT ATGATGTTCA ACAATGACTG GCAAGTCGGT CCACTGCGGA ACTCATTCTG GGGAGTTGGA GCGGTTCACA AATCAAATGG AAAATCGGGC AGCTTTTCTC GTAGCTGGAA TAGAATTTAC GGCACTATGG TATTTGATAG CGGTCCCTTT GCTCTTGGTG CCAAAGTTTG GTGGCGTATC CCTGAAGATG AAAAAGAGAC TCCCACCTCC CCTGAGGGTG ATGACAACCC AGATATCACA GATTATATGG GTAATTTTGA GCTCACAGGT ATCTATGGTA TCGACGAACA TAGATTTACC ATGATGATTA GAAACAACTT CTCCAACCCA AATTATGGGG CTATTGAAGC CACTTGGAGC TACCCCATCA TAGGACAGCT GCGGATCTAC ACTCAGTACT TTAATGGCTA CGGAGAGAGT TTAATTGACT ACAACTCCCA TACTCAGCGT ATAGGGATAG GCGTATCAAT CAACGACATT CTGTAA
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Protein sequence | MKSQSTIHLS LSLLALLPTF FISSSVYAHD LKNHETHHEE KTVATAKEDN TKTIEREHNN SLVDERVHDE LATSELPFVM TPHNVNYILP ATYNTSPNMA PFEEEAKEHP FDLDNMEAKF QISFKFPLMY NVFGDNGHLF VAYTNQSYWQ VYNKDISSPF RETNHEPEIF MMFNNDWQVG PLRNSFWGVG AVHKSNGKSG SFSRSWNRIY GTMVFDSGPF ALGAKVWWRI PEDEKETPTS PEGDDNPDIT DYMGNFELTG IYGIDEHRFT MMIRNNFSNP NYGAIEATWS YPIIGQLRIY TQYFNGYGES LIDYNSHTQR IGIGVSINDI L
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