Gene Swoo_0786 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0786 
Symbol 
ID6115020 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp1066698 
End bp1067693 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content44% 
IMG OID641632271 
Productphospholipase A(2) 
Protein accessionYP_001759176 
Protein GI170725150 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2829] Outer membrane phospholipase A 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000253748 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGCC AAAGCACAAT ACATCTATCG CTCTCACTCT TAGCTCTGCT TCCCACATTT 
TTTATCTCGT CATCTGTGTA TGCCCACGAT CTGAAAAACC ATGAGACCCA TCATGAAGAA
AAGACTGTAG CAACGGCTAA AGAGGACAAC ACAAAGACCA TTGAAAGAGA ACACAATAAC
TCATTAGTTG ATGAACGTGT GCATGATGAA CTGGCAACCT CGGAGCTTCC TTTCGTGATG
ACTCCCCATA ACGTTAACTA CATTTTGCCA GCAACCTATA ACACCAGCCC CAACATGGCC
CCTTTCGAGG AGGAAGCCAA AGAGCACCCC TTCGACCTGG ATAATATGGA AGCAAAATTT
CAGATAAGCT TTAAATTTCC CTTAATGTAT AACGTCTTCG GAGATAATGG TCATCTCTTC
GTCGCCTACA CAAACCAATC CTACTGGCAG GTCTACAACA AGGATATCTC ATCACCGTTT
CGTGAAACTA ACCATGAGCC AGAGATATTT ATGATGTTCA ACAATGACTG GCAAGTCGGT
CCACTGCGGA ACTCATTCTG GGGAGTTGGA GCGGTTCACA AATCAAATGG AAAATCGGGC
AGCTTTTCTC GTAGCTGGAA TAGAATTTAC GGCACTATGG TATTTGATAG CGGTCCCTTT
GCTCTTGGTG CCAAAGTTTG GTGGCGTATC CCTGAAGATG AAAAAGAGAC TCCCACCTCC
CCTGAGGGTG ATGACAACCC AGATATCACA GATTATATGG GTAATTTTGA GCTCACAGGT
ATCTATGGTA TCGACGAACA TAGATTTACC ATGATGATTA GAAACAACTT CTCCAACCCA
AATTATGGGG CTATTGAAGC CACTTGGAGC TACCCCATCA TAGGACAGCT GCGGATCTAC
ACTCAGTACT TTAATGGCTA CGGAGAGAGT TTAATTGACT ACAACTCCCA TACTCAGCGT
ATAGGGATAG GCGTATCAAT CAACGACATT CTGTAA
 
Protein sequence
MKSQSTIHLS LSLLALLPTF FISSSVYAHD LKNHETHHEE KTVATAKEDN TKTIEREHNN 
SLVDERVHDE LATSELPFVM TPHNVNYILP ATYNTSPNMA PFEEEAKEHP FDLDNMEAKF
QISFKFPLMY NVFGDNGHLF VAYTNQSYWQ VYNKDISSPF RETNHEPEIF MMFNNDWQVG
PLRNSFWGVG AVHKSNGKSG SFSRSWNRIY GTMVFDSGPF ALGAKVWWRI PEDEKETPTS
PEGDDNPDIT DYMGNFELTG IYGIDEHRFT MMIRNNFSNP NYGAIEATWS YPIIGQLRIY
TQYFNGYGES LIDYNSHTQR IGIGVSINDI L