Gene Swoo_0769 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0769 
Symbol 
ID6115003 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp1047916 
End bp1049355 
Gene Length1440 bp 
Protein Length479 aa 
Translation table11 
GC content50% 
IMG OID641632254 
Productbifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase 
Protein accessionYP_001759159 
Protein GI170725133 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2870] ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase 
TIGRFAM ID[TIGR02198] rfaE bifunctional protein, domain I
[TIGR00125] cytidyltransferase-related domain
[TIGR02199] rfaE bifunctional protein, domain II 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTTA TGAAGGTTTC TCTGCCAGCA TTTGAAAAAG CTAAGGTTTT AGTCGTCGGT 
GATGTCATGT TAGATCGCTA CTGGACGGGC CCAACTGGTC GTATTTCACC GGAAGCCCCT
GTACCTGTAG TGCAGATCAA ACAGATCGAA GACAGACCCG GTGGTGCGGC AAACGTAGCC
TTGAACGTGG CCACGTTAGG TGGACAAGTT TGTCTGGCTG GTATTGTCGG CAAAGATGAA
ACCGCTGAGG CGCTAACTCA AGGGATCCAG GCGTTAGGTG TTGAGCCTAA ATGGCACTGT
GTCGAAGATA AGCCTACCAT CACTAAGCTT AGGGTGATGT CCAGAAACCA GCAGCTCATT
CGTCTGGATT TTGAGGAGGC TTACCCTGTT GAGGAGAGTG TCTCTCTGTT TCAAAAGTCT
GAAGCCCTGC TAGACAATGT TGGCGTGGTG GTATTATCTG ATTACGCCAA AGGTGCGGTG
ACTGACCCCC AAGCGTTTAT CAAGCTTGCA AAATCTAAAG GGGTCAAAGT GCTTGTAGAC
CCTAAAGGAA GTGACTTTTC CCGCTACCGT GGCGCCTCTT TGTTAACCCC AAATATGAGC
GAGTTTGAAG GGGTGGTTGG CGCCGTTAGT TCAGAAGCGG ATCTGGTGGC TAAGGCGCAA
ACCTTGCTAG CGAATTTTGA GATTGAAGCG ATTTTGGTCA CCCGCTCTGA AAAGGGGATG
ACCCTGATCA CTTCTGAAGG ACCTGAGCTG CATATTCCAA CGGTTGCCCG TGAGGTGTAT
GACGTGACAG GCGCCGGTGA TACGGTGATT TCGGCCTTAG CGACAGCTTT GGCTGCTGGC
AGTGAGCTGC CTCAGGCTTG TGCCATTGCC AATACCGCTG CGGGTATTGT TGTGGCCAAG
CTAGGCACAT CAACAGTGAG CCGTATTGAG TTAATTGAGG CGCTCTCTTT GAATCAGGGC
GAGTCAGGCT TTGGCTCTGT CAGTGAAGAT CAACTCGTTT ACGCATTAGA GCAAGCTAAG
CTTCGAGGCG AGCGTGTGGT GATGACCAAT GGCTGCTTCG ATATTTTACA TGCAGGCCAT
GTGAGTTACT TGAAGCAAGC TAAGGCCTTG GGTGATCGCT TGATTGTTGC TGTGAATGAT
GATGAATCGG TTAGGCGTTT GAAGGGTGAT GGTCGCCCTG TGAATCAGGT TGATCGTCGC
ATGTCTGTGT TAGCTGGATT GGCTTCGGTG GATTGGGTGG TTCCTTTCAC TGAGGATACC
CCGCAGCGGA TCATCTCTAG ATTACTTCCC GATATGTTGG TTAAGGGCGG TGATTATAAG
ATTGAGGAGA TCGCCGGCGG TGAAGAGGTG ATTGCATCTG GCGGTACTGT GATGGTGCTG
GGATTTGAAG ATGGGATCTC GACGACTAAA ATTATCGAAA ATATCATGGC GAATCAGTGA
 
Protein sequence
MSVMKVSLPA FEKAKVLVVG DVMLDRYWTG PTGRISPEAP VPVVQIKQIE DRPGGAANVA 
LNVATLGGQV CLAGIVGKDE TAEALTQGIQ ALGVEPKWHC VEDKPTITKL RVMSRNQQLI
RLDFEEAYPV EESVSLFQKS EALLDNVGVV VLSDYAKGAV TDPQAFIKLA KSKGVKVLVD
PKGSDFSRYR GASLLTPNMS EFEGVVGAVS SEADLVAKAQ TLLANFEIEA ILVTRSEKGM
TLITSEGPEL HIPTVAREVY DVTGAGDTVI SALATALAAG SELPQACAIA NTAAGIVVAK
LGTSTVSRIE LIEALSLNQG ESGFGSVSED QLVYALEQAK LRGERVVMTN GCFDILHAGH
VSYLKQAKAL GDRLIVAVND DESVRRLKGD GRPVNQVDRR MSVLAGLASV DWVVPFTEDT
PQRIISRLLP DMLVKGGDYK IEEIAGGEEV IASGGTVMVL GFEDGISTTK IIENIMANQ