Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_0759 |
Symbol | |
ID | 6114993 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 1031713 |
End bp | 1033164 |
Gene Length | 1452 bp |
Protein Length | 483 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641632244 |
Product | peptidase M16 domain-containing protein |
Protein accession | YP_001759149 |
Protein GI | 170725123 |
COG category | [R] General function prediction only |
COG ID | [COG0612] Predicted Zn-dependent peptidases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATAACC TATGGCGATG GAGTCTTCCC CTGAACAAGT ACCTCCTATT TGGCTTAACT GCACTGCTCT CAAACCAGAG CCATGGACAC GAGTTAGCGC AGATGGCAGC TCCTCTTTAT TCCCTAGAGC AGACTATCTC CTACCGAGAA CTGGATAACG GTCTCCAGCT TAGGCTACTG CCTATCCCAT CTAGTCGCAG TGTTTCCATT GCCACCCAAT TTAGTATCGG ATCCAGAGAT GAGATAGTTG GACAAACTGG CTACGCTCAC CTGTTTGAAC ATATGCTCTT TAAGGGCAGT GAAAATGCTC CCGGCGACAG CTATGCTCAG ACCATGAGCG CCCTCAGTGG GCAGTTTAAC GCCTCAACCT TCTTCGATTT TACTAACTAC TATCTCACCC TCCCATCGGA AGCCTTGGAG CTTGCTCTTT GGCTCGAAGC CGACCGTTTT ATTCGCCCAA ACCTGACACC TGAAACCGTT AAAAATCAGC AGGCTACAGT ATTGGAGGAG ATGGCGACCA CCATAGATAA TCAAGCTTAT GTGCGTGATG CTATGGAGTT TCTACTGACA CAGGCTAAGG GAACACCTTA TGGCCATTCG GTTATCGGCA GTAAAGAGGA TGTAAGCAAG GCAACGGTCA AGCAGCTCAC TCTTTTTCAT CAACATCATT ACCGCCCCGA TGCCGCGCAG ATAAGCATAG TCGGCGGTTA CACGCAGGAG ACAAATAGCT GGATAGACAG TGCATTTGGG CAGTGGCAGC CTCTCTCCCA GCCCCCAGAA AAAACAGCAG CAGACTCACA AGCTGCAATA AAACTTGAAA ACCGATACGT CCACGGTGAG ATCATCGACG ATCGTGGTCC TTGGCCCGCC CTTTTACTCG CTTGGCACAC TGTAGGGCAA CAAGACAAAG ACGCAGAAGC AGTTACACTA CTGGAGGCTT ACCTGTTTCA AAATCGCGCC AGCTTAATTA AACAAAGCGG CCTGACAGAT CCAGAGCAAC TACTCACATA CTCTATTCCT CTCTCTATGG AGCTAATGGG GGTGAGCAAT CTAGTGGTGG TTCCCAGAGC CAGAGCTTCG CTCGATCAAC TAACAAAAAA TGTGCAGCAG ATGATCAGTA ATATTGCCAA ACAGGGCATA GATAGCGCAT CACTTGAACA GCTAAAAGCC AACTGGCTTA ACCAAAGCCT TCGACGACTT GATCAACCAT CTAGACTCGC CCGTCATCTT TCTGCCACCC AAGCAAGGGA TAAACTAGTT CCATTAACAG GCCCATGGGA GCGAATTAAT GCAGTCACAA ATGAGCAGAT ACAAGCAGTG GCAAACACTT ACTTTAACCA AGGTTACGTC AGACTCGATC TTCTGCCTCC TTGGTATATA AGATGGACAA AAGCCCTGCT TGAGTTTTTA CCAGAAAGCG TGAGTAACAG TCTTGAGGAG AGTGTTTTAT GA
|
Protein sequence | MNNLWRWSLP LNKYLLFGLT ALLSNQSHGH ELAQMAAPLY SLEQTISYRE LDNGLQLRLL PIPSSRSVSI ATQFSIGSRD EIVGQTGYAH LFEHMLFKGS ENAPGDSYAQ TMSALSGQFN ASTFFDFTNY YLTLPSEALE LALWLEADRF IRPNLTPETV KNQQATVLEE MATTIDNQAY VRDAMEFLLT QAKGTPYGHS VIGSKEDVSK ATVKQLTLFH QHHYRPDAAQ ISIVGGYTQE TNSWIDSAFG QWQPLSQPPE KTAADSQAAI KLENRYVHGE IIDDRGPWPA LLLAWHTVGQ QDKDAEAVTL LEAYLFQNRA SLIKQSGLTD PEQLLTYSIP LSMELMGVSN LVVVPRARAS LDQLTKNVQQ MISNIAKQGI DSASLEQLKA NWLNQSLRRL DQPSRLARHL SATQARDKLV PLTGPWERIN AVTNEQIQAV ANTYFNQGYV RLDLLPPWYI RWTKALLEFL PESVSNSLEE SVL
|
| |