| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0749 |
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| Symbol | |
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| ID | 6114983 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 1023045 |
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| End bp | 1024355 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641632234 |
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| Product | type II and III secretion system protein |
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| Protein accession | YP_001759139 |
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| Protein GI | 170725113 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4964] Flp pilus assembly protein, secretin CpaC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTCAA GAAAGTTAAT CGCAATTATT TGGGCATGTA TCTTCATCCC GCTTGTTAGC
TACGCACATA ATAACACCCC ACTTAAGCTC TACATGGGGG CTGTAGAACT TTATAACGCC
AAAAATGTTG AACGAATTGT AGTGGGTAAC GGCAAAGTAC TCAGTGCTAA AGTTATCGAT
GATAAAGGTG TTTTACTGAT CGCTGAGTCT CCGGGAAATA CCGACGTACA GCTGTGGCAA
AAAGATGGCA AGCTGATCAA GCTGAGCATC TCTGTCACGC CAGATAACTC ACTGAAAACC
ACTGATACCA TAAAAAAGAT GTTGGCGGCT TTCCCTTCGA TTAAGGTCAC AGAAAATGAT
GGCTTGATCA TAGTTCAAGG TGAGGCAGAC CTCTCCCAAA AGGAGCAGTT AGAGACAATA
ATAGAAGCCG ACCCAAATGT GGTCTCCTTA ATCAAATACC TTAAGTTTGC CAAGACTATG
GCTCCCATGA TTAAGATGCA GGTTAAGATT GTTGAGTTTA ATAAATCAAC CCTGAATAAC
ATAGGTATCA AATGGGAATC ATCCATGGCT GGGCCTGCAT ATGGCGCGGC TAAAGCTTTC
TCCGCTAATC CCATCTTCAG CGTATCCTCA CCGGGGCAGT ATTCAGAAAC AATAACGAGT
GCAATCACCG ATAGCATTGG CGTCTTAGAT ACCCGAGGGT GGAACTATTT CGGCATAGTG
ACCGGCATAG GCTCGCAGAT ACAGCTGCTA TCAGAAAAGG GCGATGCCCG CATGCTGGCT
GAACCCAACC TCACCACTCG CAGTGGTGAA TCGGCTAACT TTCTCGCCGG TGGTGAATTC
CCTATTCGCA GTGTCAGCGG CCTTGGCGCA GTTGATGTTG AGTACAAAGA GTACGGCATC
AAGCTCGATA TCGAGCCTGT AGTCGATGAC GATCTCAATA TTGTCAGTAG AGTGATGGCC
GAAGTTAGCT CTATCGACCC TTCAGTCGCT GTCGACGGTA TCCCAGGTAT GCTCACTAGG
CGCACTGAGT CTGTCATCAA CGTTAAGAAT AATGAAACCA TCGTTATCTC GGGATTAGTT
AACAGTGAGA TGTCAAAAAT CGTCAACAAG TTCCCTCTGC TAGGTGATAT CCCCATTTTA
GGTGAACTGT TTAAGTCCAG AGACTTTAAG GATAACAAGA GTGAGCTGGT TATCTTTGTC
ACCCCAACTG TCGTATACCC AGGTGAGGAG AGCCACGATA AGCAGCTAGA GCGCGGGTTA
GAGATGGCTG AAGAAACCAA TAAGCTTGAA GCTTTTTATA TTCTGGATTA G
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| Protein sequence | MNSRKLIAII WACIFIPLVS YAHNNTPLKL YMGAVELYNA KNVERIVVGN GKVLSAKVID
DKGVLLIAES PGNTDVQLWQ KDGKLIKLSI SVTPDNSLKT TDTIKKMLAA FPSIKVTEND
GLIIVQGEAD LSQKEQLETI IEADPNVVSL IKYLKFAKTM APMIKMQVKI VEFNKSTLNN
IGIKWESSMA GPAYGAAKAF SANPIFSVSS PGQYSETITS AITDSIGVLD TRGWNYFGIV
TGIGSQIQLL SEKGDARMLA EPNLTTRSGE SANFLAGGEF PIRSVSGLGA VDVEYKEYGI
KLDIEPVVDD DLNIVSRVMA EVSSIDPSVA VDGIPGMLTR RTESVINVKN NETIVISGLV
NSEMSKIVNK FPLLGDIPIL GELFKSRDFK DNKSELVIFV TPTVVYPGEE SHDKQLERGL
EMAEETNKLE AFYILD
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