| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0748 |
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| Symbol | |
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| ID | 6114982 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 1021317 |
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| End bp | 1023035 |
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| Gene Length | 1719 bp |
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| Protein Length | 572 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641632233 |
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| Product | FHA domain-containing protein |
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| Protein accession | YP_001759138 |
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| Protein GI | 170725112 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTAATG TCATCGTAAG CACGACTAAA GGCACCAAGG TGGGTGAGTT CCAGTGTATT
CACTCCCACT GCAAAATTGG CAAAGATCCA GAGCAACTTA TCGTATTAAG AGGCTTTAAA
GTATCCAAAC ATCACGCAAT TTTAACCCAG AGTGATGATG GAATTTATAT CCGCGATAAT
AAAAGCCGCA CCGGATTAAA AGTCAATGAT GAGAAGCGGG ACCAATATGG CCCGCTCTCT
ATGACAGATA AGATCCAAGT AGGTGATTAT CAGATTCGCG TTCACAGCAC AGATCCCCAA
TACCAAGATG CGCCTCAATA TGAGCAGGCT GAAACCAAGG TCACCAAAGA AGTAACTGAG
GAGCTTCCTC CAACAAAAGA GGCTGATAAT GCTCCGGAAC AGGAGGAGAA GCCAGTTCTC
AGCGATAAGC AGCTTAAGCA GATCGCAACT CGAAACGAAT GGCGCAGAAA GGTGCACTCA
GAACTGCTTA AGTTGATGGA CTTAAGGCGC GTCAATGTCA ACGAGATGAG TGATGTGGAG
CTAAGAGCCC AGAGTGAATC ACTTATCAAT CAGATCATCA CCAGTATTAA TCTACCAAAA
GATATTGAGG TCGAGTCCCT CACCAAGGAG GTGTTGGATG AAACCATTGG ACTTGGCCCA
CTAGAAGGCT TGATAGACGA CCCCGACGTT ACAGAGATAA TGGTCAATAG TCATGATCAG
ATCTTCTATG AGAAAGCCGG TAATCTCTAC CTCTCAGATA TCGCTTTTTC AGATGATCAA
GCTGTCTTAG GCGCAATTGA GCGTATCGTC ACCCCAATCG GCAGACGTAT CGATGAGAGC
TCTCCTATGG TCGATGCGCG ATTAAAAGAT GGCTCTCGAG TAAATGCGGT TATTCCTCCC
CTTGCCCTTA AAGGCCCCTG CATTACTATC CGGAAATTTA TGCAGCAAAG GCTAAGCTGC
GATGACTTAG TCAAATTTGG CTCTATGAAT CAAGCCATGG CAGGGTTTCT TGAAACTGCC
GTGAATCAGA AAAAGAACAT CATCATCTCT GGCGGTACAG GCTCAGGTAA AACAACCCTG
CTTAATGTGC TCTCAAACTT TATCCCCGAC AATGAACGTA TCGTCACCGT TGAGGATGCC
GCTGAGCTTC AGCTCTACCA GCCCAACTTA GTTTCACTGG AAGCCCGTCC ACCAAACCAA
GAGGGGAAAG GCGCCATTGA GATTAGAGAT TTAGTCAAAA ACTGCCTCAG GATGCGCCCA
GACCGTGTGG TCATTGGTGA GTGTCGTGGC GGTGAAGCTT TAGATATGTT GCAGGCGATG
AATACAGGTC ACGACGGCTC GCTAACAACC GCACACTCTA ACTCACCACG GGACTGTATC
TCACGTCTGG AGGTGATGGT GATGATGGCA GGGATGGATC TGCCCGTCTC CGCTATTCGC
GAACAGATAA CCTCAGCCGT CAATATCATA GTGCAGCAGT CACGCTTTTC TGATGGTTCC
CGACGGATCA CCAGCATCTG TGAAATCACA GGTTTAGAGG GCTCGATTGT CCAACTGTCA
GAGATCTTTA AATTTGAACA AACTGGCTTC AATAGCGAAG GAAAGGTCCA AGGTTACTAC
ACTGCCACAG GCACTATGCC TGAGTTTTAT GAGCAGCTAC GCAAGCAAGG TGTAAAAGTG
AGACTGGATA TCTTCGATAA GGATAAAAGA GATGACTAG
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| Protein sequence | MFNVIVSTTK GTKVGEFQCI HSHCKIGKDP EQLIVLRGFK VSKHHAILTQ SDDGIYIRDN
KSRTGLKVND EKRDQYGPLS MTDKIQVGDY QIRVHSTDPQ YQDAPQYEQA ETKVTKEVTE
ELPPTKEADN APEQEEKPVL SDKQLKQIAT RNEWRRKVHS ELLKLMDLRR VNVNEMSDVE
LRAQSESLIN QIITSINLPK DIEVESLTKE VLDETIGLGP LEGLIDDPDV TEIMVNSHDQ
IFYEKAGNLY LSDIAFSDDQ AVLGAIERIV TPIGRRIDES SPMVDARLKD GSRVNAVIPP
LALKGPCITI RKFMQQRLSC DDLVKFGSMN QAMAGFLETA VNQKKNIIIS GGTGSGKTTL
LNVLSNFIPD NERIVTVEDA AELQLYQPNL VSLEARPPNQ EGKGAIEIRD LVKNCLRMRP
DRVVIGECRG GEALDMLQAM NTGHDGSLTT AHSNSPRDCI SRLEVMVMMA GMDLPVSAIR
EQITSAVNII VQQSRFSDGS RRITSICEIT GLEGSIVQLS EIFKFEQTGF NSEGKVQGYY
TATGTMPEFY EQLRKQGVKV RLDIFDKDKR DD
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