Gene Swoo_0717 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0717 
Symbol 
ID6114951 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp984025 
End bp984705 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content44% 
IMG OID641632202 
Producthypothetical protein 
Protein accessionYP_001759107 
Protein GI170725081 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1392] Phosphate transport regulator (distant homolog of PhoU) 
TIGRFAM ID[TIGR00153] conserved hypothetical protein TIGR00153 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value2.53337e-08 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value1.17044e-08 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGCCAGTAA ACTCTATTTT GGGCGTGTTT GCAAAATCGC CAATCAAGCC TCTACAAGAG 
CATATAGATA AAGTACACCA ATGCGCATCG ATTCTAGTGC CATTTTTTGA TGCTACCGCT
TCAGGTGACT GGAGTGGTGC TGCTGAAATA CGACAGCAGA TCAATGTCAC GGAAAGGGAA
GCGGATTCAC TAAAACGTGA AATACGTCTC ACTCTTCCCG GCGGCCTGTT TATGCCTGTC
GAACGAACCG ACTTACTGGA GCTACTTACC CAGCAAGATA AGATCGCTAA TAAAGCGAAA
GACATTTCAG GTCGTATCCT CGGCCGTGAG CTTCTGATCC CAGAAGCAAT TCAAGAACCA
TTTAAAGCGT ACTTGCAGCG CTGCTTAGAT GCAGTAACTC AAGCAAAACA AGCAATTAAC
GAACTCGATG ATCTGCTAGA AACAGGTTTC CGTGGTCGTG AAGTTGATTT GGTCGCTAAA
ATGATTGTCG AACTCGATAA AATCGAAGAA GATACGGATG ATCTTCAAAT CAGTATTCGT
CGTCAGCTGT TCGCTATCGA AAACGATTTG AACCCGATCG ACGTTATGTT CCTTTATAAG
ATAATTGAGT GGGTTGGTGA TTTAGCAGAT CTTGCTGAAC GTGTCGGTTC CCGCTTAGAG
CTAATGCTAG CTCGCGTCTA A
 
Protein sequence
MPVNSILGVF AKSPIKPLQE HIDKVHQCAS ILVPFFDATA SGDWSGAAEI RQQINVTERE 
ADSLKREIRL TLPGGLFMPV ERTDLLELLT QQDKIANKAK DISGRILGRE LLIPEAIQEP
FKAYLQRCLD AVTQAKQAIN ELDDLLETGF RGREVDLVAK MIVELDKIEE DTDDLQISIR
RQLFAIENDL NPIDVMFLYK IIEWVGDLAD LAERVGSRLE LMLARV