Gene Swoo_0662 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0662 
Symbol 
ID6114896 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp915515 
End bp916150 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content44% 
IMG OID641632148 
ProductcAMP-regulatory protein 
Protein accessionYP_001759053 
Protein GI170725027 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value3.39306e-08 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000137041 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCTCTGA TTGGTAAGCC GAAACCAGAT CCTACTTTGG AATGGTTTTT ATCACACTGT 
CACATTCATA AGTATCCAGC CAAAAGCACT TTGATCCACG CTGGTGAAGA GTCAGATACT
CTTTACTATA TCGTCAAAGG CTCAGTCGCT GTTTTAATCA AAGATGAAGA GGGTAAGGAG
ATGATCCTTT CTTACCTGAA TCAGGGCGAC TTTATTGGTG AACTTGGTTT GTTCGAAGAG
CAAGCTGAGC GTACAGCCTG GGTTCGCGCT AAACAACCTT GTGAAATTGC TGAGATCTCT
TACAAGAAAT TTAAGCAGTT GATCCAAGTA AACCCTGAAA TTTTGATGAA ACTGTCTTCT
CAGATGGCTT ACCGTCTACA CAGCACAAGT CAGAAAGTCG GCGATCTTGC CTTCCTTGAT
GTTGCAGGAA GAATTGCCCA GACCTTATTA CATCTGGCCA AACAGCCTGA TGCGATGACC
CACCCAGACG GCATGCAGAT TAAGATCACT CGTCAAGAGA TAGGTCAAAT CGTTGGCTGT
TCACGTGAAA CGGTTGGTCG TATTCTTAAG ATGCTTGAAG AACAAAACTT GATCCAAGCA
CACGGTAAAA CAATCGTAGT TTACGGAACT CGCTAA
 
Protein sequence
MALIGKPKPD PTLEWFLSHC HIHKYPAKST LIHAGEESDT LYYIVKGSVA VLIKDEEGKE 
MILSYLNQGD FIGELGLFEE QAERTAWVRA KQPCEIAEIS YKKFKQLIQV NPEILMKLSS
QMAYRLHSTS QKVGDLAFLD VAGRIAQTLL HLAKQPDAMT HPDGMQIKIT RQEIGQIVGC
SRETVGRILK MLEEQNLIQA HGKTIVVYGT R