Gene Swoo_0647 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0647 
Symbol 
ID6114881 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp893830 
End bp896340 
Gene Length2511 bp 
Protein Length836 aa 
Translation table11 
GC content46% 
IMG OID641632133 
Productpeptidase S8/S53 subtilisin kexin sedolisin 
Protein accessionYP_001759038 
Protein GI170725012 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG4935] Regulatory P domain of the subtilisin-like proprotein convertases and other proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value3.68401e-08 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGTTTAATA AGTTGACACC GATCGCGCTT GCCATTGCTG GCGCCATTAC GGTATCTGCA 
GCCCCCGTTC AGGCTAAAGT GACGCAACAT GAATATGTGA AAGACTCAAT TCTTGTTGTA
TATAAAGATA ATGCCACAAA ATCTGAACGT CTTTCTGCAC AGCGCTTAGT GCGCGGTTCA
ATACGTGACG TCAATGCCGA TGGTGTTGAT GATAAGTTCG CTAATTTAAT GGGTGGTAAG
CTGGCAAATC TATCACTGCG TTCAGGATCT GATGTATCAA AAGCAATTAA AATGATCAGT
CAGCATCCAG CAGTTAAGTA TGCAGAACCA AACTATGTGA TTAAGGCGGT AGGTACGCCA
GATGATCCAA GTTTTGCATC ACTGTGGGGA ATGAACAATA CAGGTCAGGA CGGTGGAACC
GCCGATGCTG ATATTGATGC GGTAGAAGCA TGGGATATTT CAACAGGTGA TACCGATGTT
GTTGTGGCGG TGATCGATAC AGGTGTTGAT TACAACCATG AAGATCTTCA AGGTAATATC
TGGACTAACC CGAATGAGAT AGCCGGTAAT GGTATCGATG ATGACGGTAA TGGCGTTATC
GATGATATCC ATGGTTACAG CGCTATCGAT GATGATGGCG ATCCAATGGA TGGTAACGGC
CATGGTACCC ACGTATCAGG AACTATTGGT GCTAAAGGTA ACAATGGCGT AGGTGTTGCT
GGGGTTAACT GGGATGTGTC AATTATTGGT TGTCAGTTCT TGGATGCTGG TGGTTCAGGT
TCGACTGCAG GTGCGATCGC ATGTATAGAT TACGTGACAA ACCTTAAAGT TAACCATGGT
GTTGACGTTA AGGCGAGTAA CAACTCGTGG GGCGGCGGTG GATTTAGCCA AGCGCTAAAA
GACTCTATCG AATCAGGTGG TGACGCGGGG ATCTTATTTG TCGCAGCCGC GGGTAATGGT
GCTTATGATA ACGATGCTAG CCCAAGTTAT CCTGCGAGCT ATGACTCTGC TGCTGTAATG
GCGGTTGCAA GTACCGATCG TAATGACAAT ATGTCAGGTT TTTCTCAATA TGGTCTTACA
AGTGTTGATA TAGGTGCACC TGGTTCGGCT ATTTTGTCGA CGACACCGGG TAACAACTAT
AGCTCATTTA ACGGTACCTC AATGGCGACG CCGCATGTTG TTGGTGCTGC TGCATTAGTA
TGGTCTATTA ACCCTGACCT CACTATTGAC GAGATGAAGC AACTGCTGAT GGATTCAGGT
GATTCAAATG CAGACCTAAC GGGTAAAACC GTGTCAGGTG CACGTCTGAA TGTAGCGACA
GCTCTGGATA TGGCTGATCC ATCTCCAAGT TACCGATTCA CAGTCACGCC ATCTTCACAA
ACAATCGAAG CGGGCTCTGC TGCAAGTTAT GACTTTAGTG TTGGCAGCGT GGCAGATTGG
GATGGAACTG TTGCATTGAC AGTAGAAGTT TCTCCAGCCC TTGATGGTGT TTCTCTATCA
ACTGATTCTG TGATGGCTGG TGATAACTTT ACCCTTGATG TCATGACGGC TGCTGCAACG
CCTTGGGGAG ATTACACCAT TACCGTTTCT GGTGATGATG GAGCTATCCA GAAGAGCAAA
TCGGTGTCAT TAGGCATTCT GCCACAGGGT ATCGAGGACT ATCCATACAG TAACGATGAT
CCTGTTAGTA TTCCGGACAA TGACTCAAAT GGTATCGTAA GCACAATTGA AGTTGCTGAT
GATCTACAAG TGTTTGGTGT TACTGCTGAT GTGAATATTA CTCACACTTG GAGTGGTGAC
CTTATCGTGA CACTGACTTC GCCAGAAGGC ACAGAGTCTG TACTGCACAA CCGCTCTGGT
GGCAGCGCCG ATGATGTTGT AGAAAGCTGG GATCTTGCAG ACTTTAACGG TGAGATGGCG
ATGGGTACCT GGACTCTGTC TGTTAGTGAT AATGCAGCAG CAGATTTAGG AACGCTTAAT
AGCTGGGGTA TCATTATCTC AGGTGTAGGT GACACAGCCC CAGCCGCGCC TGTAGCTGGT
TTCGATTACA GTGCTGAAGG GTTGAGTGTT AGCTTCACCA ATACAAGTAC AGATGCGAAC
GATGATATCG TTAGCTATAG CTGGGACTTT GGTGATATGG GCACTTCAAC TGATATGAGT
CCATCTCATA CCTACGCATC AGCGGGTAGC TATGCAGTTT CACTAACAGT GACAGATGCT
GAAGGTAACA CTGATACAGC TAACATGAAT GTTGACGTAT TTGATAATGT GATTACGGCT
GAAGTACTTC GAGCTAAGCT ATCTCGTCGT GGCAGTGCGC TAGTTGATCT GACTTGGGAT
GGAGCAAATG GCAACTCAGT AGATATCTAC CGTGATGGTG AGATGGTTGC GACGACAGAG
AATGATGGTC GTTACCGTGA TCGTTTCACA AATGCACCTG CATCGGTTGA GTACACAATC
TGTGAAACGG GTTCTAGCCT ATGTTCTGAT CCAATCACAG CTCAGTTCTA A
 
Protein sequence
MFNKLTPIAL AIAGAITVSA APVQAKVTQH EYVKDSILVV YKDNATKSER LSAQRLVRGS 
IRDVNADGVD DKFANLMGGK LANLSLRSGS DVSKAIKMIS QHPAVKYAEP NYVIKAVGTP
DDPSFASLWG MNNTGQDGGT ADADIDAVEA WDISTGDTDV VVAVIDTGVD YNHEDLQGNI
WTNPNEIAGN GIDDDGNGVI DDIHGYSAID DDGDPMDGNG HGTHVSGTIG AKGNNGVGVA
GVNWDVSIIG CQFLDAGGSG STAGAIACID YVTNLKVNHG VDVKASNNSW GGGGFSQALK
DSIESGGDAG ILFVAAAGNG AYDNDASPSY PASYDSAAVM AVASTDRNDN MSGFSQYGLT
SVDIGAPGSA ILSTTPGNNY SSFNGTSMAT PHVVGAAALV WSINPDLTID EMKQLLMDSG
DSNADLTGKT VSGARLNVAT ALDMADPSPS YRFTVTPSSQ TIEAGSAASY DFSVGSVADW
DGTVALTVEV SPALDGVSLS TDSVMAGDNF TLDVMTAAAT PWGDYTITVS GDDGAIQKSK
SVSLGILPQG IEDYPYSNDD PVSIPDNDSN GIVSTIEVAD DLQVFGVTAD VNITHTWSGD
LIVTLTSPEG TESVLHNRSG GSADDVVESW DLADFNGEMA MGTWTLSVSD NAAADLGTLN
SWGIIISGVG DTAPAAPVAG FDYSAEGLSV SFTNTSTDAN DDIVSYSWDF GDMGTSTDMS
PSHTYASAGS YAVSLTVTDA EGNTDTANMN VDVFDNVITA EVLRAKLSRR GSALVDLTWD
GANGNSVDIY RDGEMVATTE NDGRYRDRFT NAPASVEYTI CETGSSLCSD PITAQF