Gene Swoo_0643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0643 
Symbol 
ID6114877 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp889452 
End bp890219 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content47% 
IMG OID641632129 
Productcurli production assembly/transport component CsgG 
Protein accessionYP_001759034 
Protein GI170725008 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1462] Uncharacterized protein involved in formation of curli polymers 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0140532 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value1.5798e-08 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGAAATACT TACTACCTCT AGTTGTCATC GGTCTGCTTT CAGGCTGTGG TCTGCTTCCT 
AAGCCGGAGC TAAATGTGAG TCAGGCTGAG CTCAATCCAG TGAGCGAGAC CATGTTAGCA
CTGCAAGCGA AAAAGGGGCC TAAATACCCT ATTCCCGTTG CTGTGTATTC ATTTAGAGAT
CAAACGGGGC AGTATAAGCC TCAGCAGAAT GTTAGCTCAT TTTCTACTGC GGTGACCCAA
GGCGCGACCT CTATGCTAAT TCAGACGCTG CTGGACTCTC GCTGGTTTAC CCCTGTGGAA
CGTGAAGGGT TACAAAACCT GTTAACTGAG AGAAAGATAA CCAAGAAGCA ACCTAAGAGT
AAAGACTCAG AGGTGCCTCA ACTGACCAAT GCTCGCCTGT TACTTGAAGG TGGGATTATT
AGTTATGAGA CAAATGTGAG TACTGGTGGT ATCGGCATGG AGTATTACGG TATCGGTGCT
TCTGAGCTCT ACCGTGAAGA TCAAGTCACC ATCTACTTGA GAGCTGTCGA TGTGCACAGT
GGAAAAGTGA TGATGTCGGT ATCGACCACT AAACGTGTGT TTTCTCAGGA GTTGAGAGCG
GGTCTGTTTC GTTTTACTAG CTTAAACCGT TTGGCAGAAG CTGAGATGGG CTTTACAACT
AATGAGCCTG TGCAGTTTTG TGTGCTACAA GCGATTGAGC TAGCGGTTGC AGAGATGGTC
GATAAGGGGA TTGCGTTGGG ATATTGGAGT CCTAATTCTC AAAGTTAA
 
Protein sequence
MKYLLPLVVI GLLSGCGLLP KPELNVSQAE LNPVSETMLA LQAKKGPKYP IPVAVYSFRD 
QTGQYKPQQN VSSFSTAVTQ GATSMLIQTL LDSRWFTPVE REGLQNLLTE RKITKKQPKS
KDSEVPQLTN ARLLLEGGII SYETNVSTGG IGMEYYGIGA SELYREDQVT IYLRAVDVHS
GKVMMSVSTT KRVFSQELRA GLFRFTSLNR LAEAEMGFTT NEPVQFCVLQ AIELAVAEMV
DKGIALGYWS PNSQS