Gene Swoo_0641 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0641 
Symbol 
ID6114875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp888644 
End bp889039 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content45% 
IMG OID641632127 
Productcurli production assembly/transport component CsgE, putative 
Protein accessionYP_001759032 
Protein GI170725006 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value7.25097e-06 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value1.49917e-08 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGAAAAAGT GGGTCTATTT ATTACTGTTT CTCTTTACCT TCCCTACGGC TGCAGTTGCG 
GTGGAGGATG ACATTGAGAT TAGTGGTTTG GTGATAGATA GAACCTTGAC TCGTTTTGGT
AAAGACTTTG GTTTTTACTA CTCAGGTTAT TGGCGAGATC TCACCTTCAC CCAAGGCTTC
AATGTCACTC TATATGAAAC GGTATTCCCA CAAGCAGGCA CTCAGTTGAC TTTAGAGGTG
AATGGAAAAG CTATCTATAG AACCCACTTT GGACGTCGGG CAAACCCGGT AAAGGAGCGG
GCAGAGCAAG CAATTTTGCT TACCATAGAT CATATAGCCC AGATCAAGGC GAACGCTGTT
ACTGGTGAGC TGGCAAGTGC TGAAGATGGC TACTAA
 
Protein sequence
MKKWVYLLLF LFTFPTAAVA VEDDIEISGL VIDRTLTRFG KDFGFYYSGY WRDLTFTQGF 
NVTLYETVFP QAGTQLTLEV NGKAIYRTHF GRRANPVKER AEQAILLTID HIAQIKANAV
TGELASAEDG Y