Gene Swoo_0640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0640 
Symbol 
ID6114874 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp887672 
End bp888349 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content51% 
IMG OID641632126 
Productsingle-strand binding protein 
Protein accessionYP_001759031 
Protein GI170725005 
COG category[L] Replication, recombination and repair 
COG ID[COG0629] Single-stranded DNA-binding protein 
TIGRFAM ID[TIGR00621] single stranded DNA-binding protein (ssb) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.64603e-08 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value1.89971e-08 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGGCCAGTC GTGGTGTCAA TAAGGTAATT TTGGTCGGTA ATTTGGGTAA AGACCCTGAA 
GTTCGTTATA TGCCAAATGG CAATGCCGTC GCCAACTTTA CAGTGGCGAC GAGTGAGTCT
TGGAAAGACC AACAAGGTCA GCCACAAGAG CGTACTGAAT GGCATAATAT TGTCATGTAC
CGTCGTCTAG CTGAGGTTGC TGGTGAATAC CTTAAGAAAG GTTCTAAGGT TTATATCGAA
GGTAAACTGC AAACTAGCAA GTGGCAAGAT CAGGCAACCG GTCAAGACAG ATATAAGACT
GAGATCAATG CCAATGAGAT GCAGATGCTA GACAGTCGTG GTCAAGGCGG CGGTCAACAG
CAAGGTGGTT ATGGTCAGCA GCAGGGGCAG CAGAATCAGT ACAATGCACC TCAACAGCAA
GCACCACAAC AGGGTGGTTA TGCGCCTAAG CCTCAAGCTG CTCCTCAGCA ACAGGCACCT
CAGCAGGGCG GATACCAGTC GCAGCAGCAA GGTGGTCAAC AGCAGCAAGC GCCAGCTTAT
GCACCTAAGC CACAAGCAGC TCCACAGCAG CAAGCGCCAC AACAGCGCCC AGCGCCTCAG
CCTCAACAGC AAGCTGCACC GCAACAGAAC TTTACCCCAG ACCTTGATGA TGGTTGGGAT
GACGATATCC CGTTTTAG
 
Protein sequence
MASRGVNKVI LVGNLGKDPE VRYMPNGNAV ANFTVATSES WKDQQGQPQE RTEWHNIVMY 
RRLAEVAGEY LKKGSKVYIE GKLQTSKWQD QATGQDRYKT EINANEMQML DSRGQGGGQQ
QGGYGQQQGQ QNQYNAPQQQ APQQGGYAPK PQAAPQQQAP QQGGYQSQQQ GGQQQQAPAY
APKPQAAPQQ QAPQQRPAPQ PQQQAAPQQN FTPDLDDGWD DDIPF