Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_0636 |
Symbol | |
ID | 6114870 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 880027 |
End bp | 881844 |
Gene Length | 1818 bp |
Protein Length | 605 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641632122 |
Product | DEAD/DEAH box helicase domain-containing protein |
Protein accession | YP_001759027 |
Protein GI | 170725001 |
COG category | [J] Translation, ribosomal structure and biogenesis [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0513] Superfamily II DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0593463 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCATCCG AAGAAAAAAC TTTCCGCGAA CTCGGTCTTT CCGAGCCTTT GTTGCGTGCT CTTGATGAGC TAGGCTACGA AAAGCCTACC CCAATTCAAG CTGCAAGTAT CGACCCTCTT ATGGCCAACA AGGACATATT AGGTCAGGCA CAGACTGGTA CAGGTAAAAC TGGTGCCTTC GCTCTGCCAC TACTTAACAG CATCGACCCA ACAACCAATG CACCTCAAAT TTTAGTGCTA GCGCCAACAC GTGAACTTGC TGTTCAGGTT GCAGAAGCTT TTGCTAGCTA CTCTAAATTT ATGAAGGGCA TGCATGTACT ACCTATTTAT GGTGGTCAAA GCATGCAGCA GCAGCTTAAC TCTCTTAGAC GTGGTCCACA GATCATCGTT GGTACTCCTG GCCGTGTTAT GGACCATATG CGTCGTGGCA CACTTAAGCT CGCTACGCTT AAAGCTATGG TACTTGATGA AGCTGATGAG ATGCTAAAAA TGGGCTTCAT CGATGATATC GAATGGATCC TTGAGCATAC ACCTCAAGAG CGTCAACTAG CGCTTTTCTC AGCGACAATG CCTGAGCAAA TTAAGCGTGT TGCTAACAAG TACTTGGATA ATCCAGTACA CGTTAAAATT GCAGCGACGA CAACAACAGT TGAAACCATC GAGCAACGTT TTGTTCAGGT CTCTCAGCAC AACAAACTTG AAGCGTTAGT ACGTGTTCTT GAAGTTGAAA AGACTGAAGG CATCATCATC TTCGTTCGTA CTCGTAACAG CTGTGTTGAG CTAGCAGAGA AGCTTGAAGC TCGCGGTTAT GCATCATCAC CACTACACGG TGATATGAAC CAGCAGGCTC GTGAGCGCGC AGTTGATCAA CTTAAGCGTG GCAAGCTAGA TATCATTATC GCAACTGATG TTGCGGCTCG TGGTCTTGAC GTTGAGCGTA TCGGACACGT AGTTAACTAC GATATCCCTT ATGATACTGA AGCTTATGTT CACCGTATTG GTCGTACAGG TCGTGCTGGT CGTACAGGTA TGGCAATCTT ATTTGTTACA CACAGAGAGA TGCGTATGCT ACGCACTATC GAACGTGCAA CAAAGAGCCG TATCTCACCA ATGGACGTTC CTAGCCCAGA GACAGTGACC GAGCGTCGTC TATCTCGCCT AGGTGAGCAA GTTGCCGAGA TCATCAGCAA AGATTCTTTA GATTTCATGA AGGGTGCTGT AGCTCAACTT TGTCAACAAC TTGAAGTCGA CACTGACATT CTTGCAGCAG CACTGCTACA GCAAGTACAG AAAGAGCGTC CTTTACAGTT GCCGTCGATT AACGAGCGTC AGCGTGACAA CCGTGATGAC CGTAACTCTC GCGATCGTGG TTCACGTGAC CGTAATGATC GTCCTCGTCG TGATTCGCGC CCTACTCCAA CGAACTTGGG TAAAGCCGAT GCACTTAAGG ACAATCCAGA CGTTAAGATG AGCCGTTACA TCATAGATGT GGGTCGTGAT CATGGTGTTG GTGTAGGTAA TATCGTTGGC GCTGTTGCAA ACGAAGCAAA CATCGACAGC CGCTATATTG GTCAGATTCA GTTATTTGAT AACATGACTG CTATCGATCT TCCTGATGGT ATGCCAAAGG ATGTACTGGA CCACCTTAAA AAGGTTCGTG TTTGTGGTAA GCCACTAAAC ATTCGTGAAG CTGATGGTGC TGAGATGCCA GCTGGAGACA GCCGTCCACC ACGTCGCCCA CGTAAGCCTT CTGGTGACCG TCGCCCATCA GGTGACAGAA AGCCACACCG CAAAGGCCCA TCAAGAGATA GCGAGTAA
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Protein sequence | MSSEEKTFRE LGLSEPLLRA LDELGYEKPT PIQAASIDPL MANKDILGQA QTGTGKTGAF ALPLLNSIDP TTNAPQILVL APTRELAVQV AEAFASYSKF MKGMHVLPIY GGQSMQQQLN SLRRGPQIIV GTPGRVMDHM RRGTLKLATL KAMVLDEADE MLKMGFIDDI EWILEHTPQE RQLALFSATM PEQIKRVANK YLDNPVHVKI AATTTTVETI EQRFVQVSQH NKLEALVRVL EVEKTEGIII FVRTRNSCVE LAEKLEARGY ASSPLHGDMN QQARERAVDQ LKRGKLDIII ATDVAARGLD VERIGHVVNY DIPYDTEAYV HRIGRTGRAG RTGMAILFVT HREMRMLRTI ERATKSRISP MDVPSPETVT ERRLSRLGEQ VAEIISKDSL DFMKGAVAQL CQQLEVDTDI LAAALLQQVQ KERPLQLPSI NERQRDNRDD RNSRDRGSRD RNDRPRRDSR PTPTNLGKAD ALKDNPDVKM SRYIIDVGRD HGVGVGNIVG AVANEANIDS RYIGQIQLFD NMTAIDLPDG MPKDVLDHLK KVRVCGKPLN IREADGAEMP AGDSRPPRRP RKPSGDRRPS GDRKPHRKGP SRDSE
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