| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0608 |
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| Symbol | |
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| ID | 6114842 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 853989 |
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| End bp | 855260 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641632094 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_001758999 |
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| Protein GI | 170724973 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAATA AAGAGATCTA CTTAAGCTTT CGCGATCAGA TCTTTGAAGC GCTTGATGCT
CAGATGATTG CCAATATGCC GCGGGATGAG CTGTCTAGAC AGATCCAAAG TGCGGTTGAG
GTATTGGCGA ATAATTTCAG CCAGCCCATC TCTACCGCAG TACGCACCAT GACGGTAAAG
AATCTGGTGG ATGAACTATT GGGGCTTGGG CCGCTACAGC CGCTATTGGA AGATGACAGC
ATCAACGACA TCATGGTCAA TGGGCCAGAT CAGATCTTCT ATGAGCGCCA CGGTAAAATT
CACAGCTCAG AGGTGGTGTT TGTTAACGAA GCTCAACTAC TCGAGATAGC CCAGCGCATT
GCAGCAAGAG TTGGTCGCCG CGTCGATGAG TCCTCACCTA TGGTCGATGC CAGACTCAGT
AATGGTAGCC GAGTCAATAT CGTTATCAAG CCTATCGCCA TCGATGGTAC GACGATCTCC
ATTCGTAAGT TCAGGGAGCA GAAGATTGGG CTGGAGGAGC TGGTTGGTTT TGGCTCTCTT
TCGCCTGAGA TGGCAAGAGT CTTGATGATC GCTGCTCGCT GCCGCTTAAA TATCTTGATC
TCAGGCGGGA CAGGCTCAGG CAAGACAACC TTGCTTAATG CACTGTCTAA CTATATTGCC
GATGATGAGC GGATCATCAC CATAGAGGAC GCCGCTGAGT TAAACCTACA GCAGCCCCAT
GTGGTGAGGT TAGAAACCCG TCCAGCCAGT ATTGAGAATA GTGGTCAGGT GGATCAAAGA
GACTTGATCA TCAACTCCCT ACGGATGCGG CCAGATAGAA TCATCTTAGG TGAGTGCCGT
GGCGCCGAGG CGTTTGAGAT GTTGCAGGCG ATGAACACTG GTCACGACGG TTCCATGTCG
ACTTTGCATG CTAATACGCC AAGAGATGCG ATCTCTCGAG TTGAGTCTAT GGTGATGATG
GCATCCCTTA ACCAGCCTTT AGATGCCATC CGCCGCACTA TCGTCGGGGC GGTCCATCTT
GTGGTGCAGG TAAATCGTCA GCGAGATGGC TCACGTAAAA TCACCAGTAT CTCAGAGGTC
GTTGGCCTTG AAGGTGAGAA TGTGGTGATG GAGGAGCTAT TCAAGTTTCA ACCTACCGAA
GGGCAGAGCA TGGAAAAAGT GCTTGGTGAG TATCTCTCTC CTGGCATTAT GCAGCGCTCT
GTCTTGATGC AGCGTGCCGC TTATTTTGGG CTACAAGATG AGCTGATGCT GGCATTTAGA
GGCCAGCAAT GA
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| Protein sequence | MNNKEIYLSF RDQIFEALDA QMIANMPRDE LSRQIQSAVE VLANNFSQPI STAVRTMTVK
NLVDELLGLG PLQPLLEDDS INDIMVNGPD QIFYERHGKI HSSEVVFVNE AQLLEIAQRI
AARVGRRVDE SSPMVDARLS NGSRVNIVIK PIAIDGTTIS IRKFREQKIG LEELVGFGSL
SPEMARVLMI AARCRLNILI SGGTGSGKTT LLNALSNYIA DDERIITIED AAELNLQQPH
VVRLETRPAS IENSGQVDQR DLIINSLRMR PDRIILGECR GAEAFEMLQA MNTGHDGSMS
TLHANTPRDA ISRVESMVMM ASLNQPLDAI RRTIVGAVHL VVQVNRQRDG SRKITSISEV
VGLEGENVVM EELFKFQPTE GQSMEKVLGE YLSPGIMQRS VLMQRAAYFG LQDELMLAFR
GQQ
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