Gene Swoo_0593 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0593 
Symbol 
ID6114827 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp836769 
End bp837860 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content50% 
IMG OID641632079 
ProductNADH:flavin oxidoreductase/NADH oxidase 
Protein accessionYP_001758984 
Protein GI170724958 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCTTT TTACCCCCTA CAAAACAACA AAGTTGTCAT TGAGTAACCG CATGGTAATG 
GCACCTATGA CTCGCTCGCG CACCACACAA CCGGGAAATA TCCCCAACGA GATGATGGCG
CAATATTATG CTCAGCGTGC ATCTACTGGG CTTATCATTA CCGAGGCGAC TCAGATCTCA
GATGACAGCC AAGGTTATTC GTTTACACCT GGAGTGTATA CGCCGGAGCA GATTTTAGGC
TGGCAAAAGG TAACCTCTGC AGTGCATGAG TCGGGCGGGA AAATCTTTAA TCAGCTCTGG
CATGTGGGAC GAGTGTCGCA CCCTGTGTTT CAGCAAGGTC TAGCGCCAAT GGCGCCTTCG
GCAATAAAGC CCACTGATAC ACAGGTTTGG GTTGTTGATG CAGAGCATCC CGACGGTCAA
ATGGTAGATT GCCCTGTGCC CAGAGAGATG ACTTATCAGG ATATTAAACG TGTGGTGAAT
GATTTTGCTG ATGCTGCAGA AAATGCCATT GAAGCGGGCT TTGATGGCGT CGAGATCCAC
GGTGGTAACG GCTACCTGAT CGATCAGTTT CTGCGGACTA ACTCAAATCA TAGGACTGAT
AGTTATGGTG GGAGCCGTGA AAATCGAACT CGCTTTTTAA TGGAGGTGAT CGCCGAAGTG
AGCCAAAGAG TCGGCGCTGA TAAAGTGGGA GTCAGACTCG CACCATTTGT GACTTTTAAA
GATATGGATT GTCCCGATAT CGTCAATGCC ATCTTGTTGG CCGCAGAGCA GTTATCACAA
CTCGGCATCG CTTATCTGCA CCTATCAGAA GCGGATTGGG ACGATGCGCC CCAGATCCCC
GCTAACTTTA GAGTGAAACT AAGAGAGGTG TTTAAGGGCA CCATAATAGT CGCTGGGCGC
TATGACACCG TGCGAGCCTG CGAGATTATC GACAGTGGCT ATGCGGATCT GGTTGCGTTT
GGCCGCGCTT TTATCGCTAA CCCAGATCTC CCTTTTCGTT TACAGACGGG TAAGCCCTTA
GCCGATTTTG ATAAGGGACC ACTGTTTGGT GGCGGAGCCG CTGGTTATAC CGATTATCCA
AACTACAGCT AA
 
Protein sequence
MSLFTPYKTT KLSLSNRMVM APMTRSRTTQ PGNIPNEMMA QYYAQRASTG LIITEATQIS 
DDSQGYSFTP GVYTPEQILG WQKVTSAVHE SGGKIFNQLW HVGRVSHPVF QQGLAPMAPS
AIKPTDTQVW VVDAEHPDGQ MVDCPVPREM TYQDIKRVVN DFADAAENAI EAGFDGVEIH
GGNGYLIDQF LRTNSNHRTD SYGGSRENRT RFLMEVIAEV SQRVGADKVG VRLAPFVTFK
DMDCPDIVNA ILLAAEQLSQ LGIAYLHLSE ADWDDAPQIP ANFRVKLREV FKGTIIVAGR
YDTVRACEII DSGYADLVAF GRAFIANPDL PFRLQTGKPL ADFDKGPLFG GGAAGYTDYP
NYS