Gene Swoo_0591 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0591 
Symbol 
ID6114825 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp835354 
End bp836268 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content49% 
IMG OID641632077 
ProductLysR family transcriptional regulator 
Protein accessionYP_001758982 
Protein GI170724956 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATCACC TCAACGATCT ACAACTGGCG ATCCGAATCG CTGAGCTTGC CAGTATCTCG 
GCTGCAGGGC GTGAACTGGG CATGACACCA GCGGCGGCAA GCGCGGCGCT GCAAAGATTG
GAGCAGAAAC TTGATTGCCA GCTTTTTGCT CGTTCGACTC GCAGCATGAA GCTCACCGAA
GAGGGAAGGC TTTTTATTGA AAGCGGACGC CAAGCTTTGA CGCTACTCGA AGGCGCAAGT
AATGCATTAG CGGATAACCG AGGAGAGTTA AAAGGTGAGA TACGGATAGC TCTGCCATCA
GATATTGGCA GAAGTTTAAT CCGTCCATGG CTGGATGAGT TTGCAGCGCA ATACCCTCAG
TTAACTCTCT CCCTCTATTT TGGCGATCAG ATGACAGATC TTATCGGTCA AAATGTCGAT
CTCGCACTCA GATATGGTCA CTTAGAGGAT TCCAATTTAA TGAGACGTCA ACTGGCCATG
ACTCCAAGGG TCGCCGTCGC ATCACCTGAC TATCTAGCCA AACAGGGCAC ACCAAAACAC
CCCCATGAAC TAAGCCAGCA TAAGATACTG ATCCTCAACC GTGGTGGCGA GCCTTGGCAT
AAATGGCACT TTAGCCAGAA AGGTGAGGAG TTTGATATCA ACGTGCGTGG CGCTAGGCAG
TGCAATGATG GCGCGGTGCT CAGAGAGTGG GCCTTAGATG GAATGGGAAT CGCCTATAAG
AGTTGGCTCG ATGTCGCAGC AGATGTACAT CAGGGAAGGC TTAAATTGCT TTTTGCAGAC
CAGCTTGCCA GTAAAACTCC TCTGCAGCTG GTCCACCTGC AAACTGATTA CCCTAAATTT
AAAGTACGCT GCATCATGGA TCTTCTAAGC GATAAGATCC AAGAGTTTCA GCAGATCTAC
CCACTCGAAA AATAG
 
Protein sequence
MYHLNDLQLA IRIAELASIS AAGRELGMTP AAASAALQRL EQKLDCQLFA RSTRSMKLTE 
EGRLFIESGR QALTLLEGAS NALADNRGEL KGEIRIALPS DIGRSLIRPW LDEFAAQYPQ
LTLSLYFGDQ MTDLIGQNVD LALRYGHLED SNLMRRQLAM TPRVAVASPD YLAKQGTPKH
PHELSQHKIL ILNRGGEPWH KWHFSQKGEE FDINVRGARQ CNDGAVLREW ALDGMGIAYK
SWLDVAADVH QGRLKLLFAD QLASKTPLQL VHLQTDYPKF KVRCIMDLLS DKIQEFQQIY
PLEK