| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0588 |
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| Symbol | |
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| ID | 6114822 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 832127 |
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| End bp | 833110 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641632074 |
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| Product | dTDP-4-dehydrorhamnose reductase |
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| Protein accession | YP_001758979 |
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| Protein GI | 170724953 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1091] dTDP-4-dehydrorhamnose reductase |
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| TIGRFAM ID | [TIGR01214] dTDP-4-dehydrorhamnose reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.749225 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTAGAAA AAATCATTAG ACTAGAGAGG ATTAATAATA ACCAGCGGAT TATTGGAGAT
AAAGTGGCAA GAGTTATGAT TACAGGGTCA ACGGGTCTCT TAGGTAGAGC GGTGGTTAAG
CAGCTTAAGC AAACAGATGA GCACCTACTT ATTGCAACGG GGTTTAGCCG CGCCGAAACT
GGTATATACA AGTTAGACCT GACCGACGAA GAGGCGATCA GTGAGTTTAT TGGAGTCCAT
CAGCCGGATG TGATTATTCA CTGCGCAGCA GAGCGTCGAC CGGATATCTC AGAACAATCT
CCCGAAGCGG CACTGGCACT TAACCTTGGT GCAACTGGGG CTTTAGCAAA AGCGGCTAAG
CAGCAGGGAA CTTGGCTTAT CTATATCTCC ACAGATTATG TGTTCGACGG GACTGAACCT
AGCTACAGTG AGGCTGATAA GCCAAATCCA GTTAATTTTT ATGGTGAGTC TAAGTTACAG
GGCGAGCAGG CTTTATTAGC AACAGCCAGT GATTTTGCCG TGTTGAGGTT GCCTATCCTC
TATGGTGAGG TTGAGAAAAT TGAGGAGTCT GCTGTGTTAG TGCTATTAAA TCAGCTGCTC
GACAGTACGC CACAAAATGT GGACAATTGG GCCGTTCGCA GCCCCACTTC AACTCAAGAT
ATTGCTCTAG CCATTGAACA GATGATAGGC CTTCACCTGA AAGGAGAGGA TCTGAATGGG
ATCTATCATT TCAGCGCTAA ACAGACCATG AGCAAATATC AGATGCTACT TGTGTTAGCG
GAGCTATTTG AGCTAAACAG TGAGCACCTT ACGCCGATAT CATCCCCTAT GGACACGGCT
AAAAGACCCC ATGATTGTAC CTTGAGCTGC CAACGTCTAA CAGAGTTAGG GATCGCCTCT
CAAATCGCTT TTAAGGAGGG AGTAAAAGAG AGCTTAGTTA GCTCACAAAA TGCATTGTCC
TTAATAGGAT TAACCTTGAA ATAA
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| Protein sequence | MVEKIIRLER INNNQRIIGD KVARVMITGS TGLLGRAVVK QLKQTDEHLL IATGFSRAET
GIYKLDLTDE EAISEFIGVH QPDVIIHCAA ERRPDISEQS PEAALALNLG ATGALAKAAK
QQGTWLIYIS TDYVFDGTEP SYSEADKPNP VNFYGESKLQ GEQALLATAS DFAVLRLPIL
YGEVEKIEES AVLVLLNQLL DSTPQNVDNW AVRSPTSTQD IALAIEQMIG LHLKGEDLNG
IYHFSAKQTM SKYQMLLVLA ELFELNSEHL TPISSPMDTA KRPHDCTLSC QRLTELGIAS
QIAFKEGVKE SLVSSQNALS LIGLTLK
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