| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0579 |
|---|
| Symbol | |
|---|
| ID | 6114813 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | + |
|---|
| Start bp | 819992 |
|---|
| End bp | 822406 |
|---|
| Gene Length | 2415 bp |
|---|
| Protein Length | 804 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 641632065 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001758970 |
|---|
| Protein GI | 170724944 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.0000168041 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.0000562277 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAT CTTTAATTGC TTTAGTTGTT GCAACTTCTA TTTCAGCTTT GAGTGTTGCA
GCTGCGCCAG TCGATAAAGA CGGCCGCTAT CTAAATACCG CTAAGGACTT GATTGGCTCT
TTATCCTATC AGGACAAACA AGAGTACATC GCTCAGTTCA ATACTCTTGA AACTCAGCAA
GAAAAAGCGG CGTTCTTCAA GATGGTGATC GTTGCTGAAA CCTCAGTTGA AAACGCTGTT
AACTTCGTAC TTGACCGCGT TGAAGCTGGC GAAGGTACGC TTGCTGATAT GGGTCTGACC
GGTACTGATG TAGAAGCGTA CATGGTGGAG TCAGGTCTGC TTACAGAAGG TCGTAACGGC
AATCTAGTTA TCGATGACAC ATCAGATGCG TATAAAGCAA TGAAGGCTCG CCGTAGCGAA
GCATGGACGA AGCACGTTCA GTACAGCGAT GACGACCCGT TCTACATCAG CCCAATCGTT
GATGATAACG AGCGTGATAT TCCTACTCCT GCTCCAATCT CAACTGACCT TAAAGTATCA
GGCTTCAACA AGGCAATGGA GAAAGCTGGT AACTCAGCTA TGATCCAGAA AGATCCTATT
ACTGGCGAGT ATACTCTGTA CCGTGAAGGT CAAGCTCCGT TAGCTCTAAC TAACGAAGAA
GCTGTTAAAA ATGCAATGCG TGTGGTTGCG TTAACAAACA CTGATGGCTA TGAGAAAGTT
CTTCAAGAAA TTCATGACCG TCAAGAAGTG ATTGTAGATC CTGTCGATGT TGTAATTACT
CCTATTGATC CAGGGTTTGG CGTAGACCCC AAACCTGGTA ACCCTACTCC ACATCCTGGT
TACTCTACCG ATGTTAAAGT CTCTGCTTTC AATAAGGCGA TGGAACGTAA AGGTAGTGAA
GTACAAATTT CTAAGACTGT TGATGCTGTG ACTGGTGAAG CAACTTACCA TTTCATTCAG
GACGGTTCAG CCCCAATCGA ACTAACTCCT GAAAATGCTG ATAAATTCAA GAAGGCTTTA
GCTAAGGCCA CAAATGACCA TCGTAGCGCA AAAATAGATC CTATAGATCC AGGCTTCGGT
GGTGACCCTG ATAAATCTCC GAAAGATACA GGTATTGATA AGATTTTAAA TGAGTTTGCT
GCGGTGAACT CAAGCATTCA AGTTGTCGCT AACTCTGCAG CTAATAATTC ATTATTGATT
GCTGATGTTG CAGCAACTCA GAGTGCATCT AATGTTGCAC TTCAGGAAGC GAGTCAAACA
TTACAAGCCA AAACTGGTAA AGCTGTTCAG GTTCTAGAAA CGGCTCGAAA TGGTATGCAG
TCAGGTGTCA ATGAGCTTCA TATTGCAGCA GGTAGTATGA AGACTTCACT CACAGCAGAG
CTAGCAGACT TACAAGCACA GATAGACCGT TTAAATTCTG GTGATGATGG GACTAATCCA
CCAACGGTGG ACGAAGAGCT TCGTGCTGGG CTCGTTGTTG CTAAAGATAA AGTAGAAACT
GAATTAGTGG CTGTAAATAA AAGTGTTGAT ATCGTAGCTA ATTCCGCTGC CAATAACAGT
ACGCTGATTG CGACGAACTC AGCTAATCAA GCTGCGACTA ACGATGCACT TAAATCTGCT
GGTCAAGAGT TACAAGCTAA GACAGGTAAA GCCGTTGAAA CGCTTGAGAC TGCACGTTCT
GGAATGAATG CAGGTGCTAA TGAGTTAATG GCAGCCCTAC AAGCGATGCA AGCTCAGATG
GATGCTCAAG CTAGACTGAT TGCTGAGTTA CAAGCAGGTG AAAACCCTGG TACTGGACTT
CCTACTGGTA TTGATGAAGA GGTACGTGAT GGTTTACAAA CAGCTTCAGC CACCATGCAG
AAAAAACTTG GTACAGCTGC AGATACGCTA AAAGCGGCTT CTAAAGGACT TAAAAATAAT
AAGCCTCAGA ATGGCGTTCA GCCTATTCAG CCTATTCAGC CAACAGACCC TGTTGAGCCA
GTAACTCCAC TTGATCCAAG AGAGCATGAA TATGGTTCAG TTGGAAACGG AGCAGCAACA
GCTTGGTTAA ATGAGCGTAT TGACTCAGGT AAGGGGCTGA TGAACGAGCA TCTTGACGCA
GAGTTTACGG CATTTGAAGA CAAGATCACC GCTATGTATC AATCCGACAT GGCATCGTTC
CAAGAAGATG TTCAAGATGA AATGGATGGA GTGATGGCAT CTACCCATGC CATCACTAAC
TCTCGTCCTT TCTTGAGTAA CGGTGGTACA GCAGTTGGTG TTGGTATTGG CGCTGCTGGT
GATGCTTCAG CTGTTGCGAT TGGTGTTGCT CATTCGTTTA AAGATACTGG TTGGTCTGTA
TCTGGTTCGG TAAATGCGAC TACCGGTTCA AGCTCTGATG TTAGTTTGGG GGCTGGTGTT
CAGTTTCAAT TCTAA
|
|---|
| Protein sequence | MKKSLIALVV ATSISALSVA AAPVDKDGRY LNTAKDLIGS LSYQDKQEYI AQFNTLETQQ
EKAAFFKMVI VAETSVENAV NFVLDRVEAG EGTLADMGLT GTDVEAYMVE SGLLTEGRNG
NLVIDDTSDA YKAMKARRSE AWTKHVQYSD DDPFYISPIV DDNERDIPTP APISTDLKVS
GFNKAMEKAG NSAMIQKDPI TGEYTLYREG QAPLALTNEE AVKNAMRVVA LTNTDGYEKV
LQEIHDRQEV IVDPVDVVIT PIDPGFGVDP KPGNPTPHPG YSTDVKVSAF NKAMERKGSE
VQISKTVDAV TGEATYHFIQ DGSAPIELTP ENADKFKKAL AKATNDHRSA KIDPIDPGFG
GDPDKSPKDT GIDKILNEFA AVNSSIQVVA NSAANNSLLI ADVAATQSAS NVALQEASQT
LQAKTGKAVQ VLETARNGMQ SGVNELHIAA GSMKTSLTAE LADLQAQIDR LNSGDDGTNP
PTVDEELRAG LVVAKDKVET ELVAVNKSVD IVANSAANNS TLIATNSANQ AATNDALKSA
GQELQAKTGK AVETLETARS GMNAGANELM AALQAMQAQM DAQARLIAEL QAGENPGTGL
PTGIDEEVRD GLQTASATMQ KKLGTAADTL KAASKGLKNN KPQNGVQPIQ PIQPTDPVEP
VTPLDPREHE YGSVGNGAAT AWLNERIDSG KGLMNEHLDA EFTAFEDKIT AMYQSDMASF
QEDVQDEMDG VMASTHAITN SRPFLSNGGT AVGVGIGAAG DASAVAIGVA HSFKDTGWSV
SGSVNATTGS SSDVSLGAGV QFQF
|
|---|
| |