| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0577 |
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| Symbol | |
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| ID | 6114811 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 810126 |
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| End bp | 816350 |
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| Gene Length | 6225 bp |
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| Protein Length | 2074 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641632063 |
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| Product | outer membrane adhesin like proteiin |
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| Protein accession | YP_001758968 |
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| Protein GI | 170724942 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01965] VCBS repeat |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.144033 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAATG AGACGTTAAA GCCATTATTA AACCGTTCAA TTTTCCTGAT GCTCCTTTGC
ATATACAGCC ATAACCTCTA TGCAGAGGGA ACCTATCAGA TGGATGCAGC CCATCCACAA
TATCTCGAAA CAGATACCTT GATGTTTGTT CATGTCGATG GGGCAAATAA GTATATTCGC
TTACACCTAT GTCGGCAGTC TAATCAAAGT GGACAGGTCT ATGCTGACAT CTACTCAACG
AATCTTGTTT CTGGCAAATA TGTAAAAAAC GCCAAGTTAG CAGATCTCAC CTCCACCGTT
GGGAATATTA GCTGTTCAGA TCCCATGACT AACCCGCTTC CAGCAACTCC TAGTAGTGGT
GAAGTCATGC ACTATCAGGT ATCAAGTGCG GGAGTGTATG CCGTCGATTT AAGTGAGTTA
TTTGATAATT ACCAGAGGTG GGATATCTCA GTTGTCGATA ACGTAGGAGA CAGCGTCGAT
CCTATGGCTA ACGACGGCAA CTTATTCTCT TACCTATGGC GATTCGATAC CCCTGGCTCT
ACGGAGCCCT ATGCGGCAGA TACTAGGATG TATATTCTAG CTCCGGGTGG TTTTGCTAAC
ACGAATTATG TGTGGGCAGC CGACCTGCAA AACTTTGCCG GGGATATTCA TAAAGTCCTC
TCAAACAGCA TAGGATTAAA TCCACCCTAC TCTGGCACGA GTAACTCTCT GTCATTCAGT
ATTGATGAGA AATTTCCCAC TTACCTTAGC TACCCAAAAG GCGCCAGTCC CTCTCCAGCT
CCTAGCAGTG CCGCTCAGCT AACCGACACC CTCAGCTTTA TCGATAGCGC AGGTAACGAC
AATGAAATAA CGCCCAATGG TGACACCATT GAAGATACAG GTACCTTCTC TTTTACTCCA
AATGCAACAG GAACTTACGC CATCAGCGTA GCTGCGCTAG GGGGAAGCTA TCAAGTTATA
TTACAAGGAG AGATGCAGCA AAATGTCACC GTTAATCACG TTTGGGATGG AAAAGATGCT
GATGGGAACG CCATGGTTCC AGCCAAATAT GATGTTAAAT TAACCCTAAA GCTAGGTGAA
TCTCACTTCG TTGTTAAAGA TGTTGAAACA AGTGGAGGAG GAACAAACAA CGGCCTAACA
ATTTTACAGG CGACCGATGA AACAACGCTT GTGGGAACGC AGGTTTATTG GGATGACACT
CCAATAGGCG GGAGTACGAA TCTCCCCAGT GGCACCCTAT CCTCTCTTGC ATCAGTAGGT
ACACACCGCC ATACATGGGG AGACTTTACC TTCACTAGCA TTGGTGATCT CAACTACATA
GACACCTATG TTTATGGTCT CTCAAGTGAC TTTGCCACTG AAGCTATCAA CGTCAATGCT
AGCGCCCCGA CAGTCACCTC AAATGGGGGG GGTCATGAAG CCGCAATCGA AGTAAATGAG
GGCAGCACCT TAGTGACAAA CGTTGTCGCA ACGGGAGGTT CAGGGTCATA CACCTATTCT
ATATTTGGCG GTGACTCGGC ACTATTTAAT ATAGATGCCA GCGGAGAGCT CACTTTTCTT
TCCGCCCCAG ACTATGAAAC GCCTTTAGAT GCAGACACCA ATAATGACTA CTTACTGTTT
GTTCGTGTAG ATGGAGGCGG CACGTTAGAA TATATTCATC AAGAACTCAC CATCTCAGTT
AACAACATAC CTAGCTCTAC TCCTCAAAGC ATATCTGTAA CCGAAGATAC TCCTACATCA
ATCACTTTAA CCGCAGCAGA TATAGATCTC GATACCCTCA GCTACAGCAT TACCAACTCT
CCAAATAATG GGGTGTTGAG CGGCACGCTC CCTAACCTAA CCTACACACC TAATTCAGAT
TATAACGGAG CCGACACATT CAGCTTTAAG GTCAATGATG GATTTACCGA CTCCAATACG
GCAACGATTT CAATTAATGT CAGCCCCATC AATGACACTC CCAGTGCCGG CAGCCAGAGT
ATTCCAGTAA CAGAAGATAC ACCGACATCC ATCACCCTCA CCGCAACCGA TATCGATCTG
GACAGCCTCA GCTATAGCTT ACTCACCTCC CCTGCAAACG GTAGCTTAAG CGGAACTCCA
CCTAACCTGA CCTATACGCC AGCAGCAAAT TATGCGGGCG GAGATAGTTT TACTTTTATC
GCCAATGACG GCAACCTGAT ATCAAATACA GCAAGTATCA CCATTACCGT GTCTGCGGTA
AACGATGCGC CGACCTCGAA TAACCAGAGC ATAACGGTGA CAGAGGATAC TCCTAAAACT
ATCACCCTCA TCGCAACCGA TGTCGAGGCC GACAGTCTAA CTTTCAGTTT AATCAGCTCA
CCCAGCAAGG GAGTTTTAAC CGGCACCCTA CCTAACCTGA CCTACACGCC AAACCTTAAT
GAGACTGGAG CCGACAGTTT CACCTTTAAG GTCAATGATG GGGCCATCGA TTCCAATATC
GCCACGGTTT CAATCAATAT CAATGCCATT AACGATGCAC CAATCTCAAA TAACCAGAGC
GTGACAGTGG CAGAGGATAC CCCTAAAGCT ATCACCCTCA TCGCAACCGA TGTCGAGGCC
GACAGTCTAA CTTTCAGTTT AATCAGCTCA CCCAGCAAGG GAGTTTTAAC CGGCACCCTA
CCTAACCTGA CCTACACGCC AAACCTTAAT GAGACTGGAG CCGACAGTTT CACCTTTAAG
GTCAATGATG GGGCCATCGA TTCCAATATC GCCACGGTTT CAATCAATAT CAATGCCATT
AACGATGCAC CAATCTCAAA TAACCAGAGC GTGACAGTGG CAGAGGATAC CCCTAAAGCT
ATCACCCTCA TCGCAACCGA TGTCGAGGCC GACAGTCTAA CTTTCAGTTT AATCAGCTCA
CCCAGCAAGG GAGTTTTAAC CGGCACCCTA CCTAACCTGA CCTACACGCC CAACCTTAAT
GAGACTGGAG CCGACAGTTT CACCTTTAAG GTCAATGATG GGGCCATCGA TTCCAATATC
GCCACGGTTT CAATCAATAT CAATGCCATT AACGATGCAC CAATCTCAAA TAACCAGAGC
GTGACAGTGG CAGAGGATAC CCCTAAAGCT ATCACCCTCA TCGCTACCGA TGTCGAAGCC
AACAGTCTAA CTTTCAGTTT AATCAGCTCA GCCAGCAAGG GAGCATTAAC CGGCACCCTA
CCTAACCTGA CCTACACGCC AAACCTTAAT GAGACTGGAG CCGACAGTTT CACCTTTAAA
GTCAATGATG GGGCCCTCGA TTCCAATATC GCCACGGTTT CAATCAATAT CGATGCCATT
AACGATGCGC CAATCTCAAA TAACCAGAGC GTGACAGTGA CAGAGGATAC TCCTAAAGCT
ATCACCCTCA CTGCAACCGA TGTCGAAGCC AGCAGTCTAA CTTTCAGTGT AATCAGCGCA
CCCAGCAAGG GAGTTTTAAC CGGCACCCTA CCTAACCTGA CCTACACGCC CAACCTTAAC
GAGACTGGAG CCGACAGTTT CACCTTTAAG GTCAATGATG GGGCCATCGA TTCCAATATC
GCCACGGTTT CAATCAATAT CGATGCCATT AACGATGCGC CAATCTCAAA TAACCAGAGC
GTGACAGTGG CAGAGGATAC TCCTAAAGCT ATCATCCTCA CCGCAATCGA TGTCGAAGCC
GGCAGTCTAA CTTTCAGTGT AATCAGCTCA CCCAGCAAGG GAGTTTTAAC CGGCACCCTA
CCTAACCTGA CCTACACGCC AAACCTTAAT GAGACTGGAG CCGACAATTT CACCTTTAAG
GTCAATGATG GGGCCATCGA TTCCAATATC GCCACGGTTT CAATCAATAT CGATGCCATT
AACGATGCGC CCATAGCAGG TGGCCAAAGT ATAGAGATGG TGCAAGCAAG CTCCATCGAA
CTCCAGTTAA ACGCCACAGA CACTGAAGGT TCACCATTGA GTTACGTTAT CGTGTCATCT
CCTCAAAATG GAACGCTAAT GGGATCTGGT CCCAATTTAA CCTACCAACC AACAGAGAGT
TTTTCAGGAG ATGATAGCTT CACATTTAAG GCCAACGATA CTGAATCTGA TTCAAATATC
GCTCTCATCA CGATTCTTGT TTTACCGGAT CTCGATCGGG ATGGAATTTC AGACAGTGAT
GATCTCGATG ATGATGGCGA TGGCATTTTA GATGTCATCG AAGGAGACTC CGACAGCGAT
GGCGACGGCA TTCCCAACAG ACTAGATACC GATTCTGATA ATGATGGTAT ACCTGATAGT
GAAGAGGGCC TAGTTGACAG TGATGGCGAT GGAATCGCTG ATTACCTCGA CTCAAGCCAA
GATGAAGACA GAGATGGGAT CCCAGATATT GTTGAAGGAA ATTTTGATAG CGATCTCGAT
GGCATCATTA ACTACCTTGA TATTGATAGC GATAACGATG GGCTAGTGGA TGGATTTGAG
GCTGGGATCT CAGGAGAGGA CTCAGACAAC GATGGGATAG ATGACCTTTT CGATGTTCAG
CAAACAAAAG GGAGGGATAC GAATAACGAT GGTATCGATG ATGATATTGA TCTTATCGAC
TCGGATAGTG ACGGTAAACC TAACTACCTA GATATAGACT CAGACAACGA CTGGATCCCC
GATGCTATCG AGGCCACCTA TGCCCGTGTT GATCTCGATA GTGACGGAAT TACCGATCTT
TACGATATCG ACATGACACA GGGAGATGAC AGTGATGGCG ATGGGATTGA TGACAGGTTC
GATATCGATA ACACCGGTCA TTTCGATGCT GATAACGATG GGATAAGTGA TGCAAAGTTA
GAGGAAAATG ATAATGACCA CGACGGCTTA GCAGATCATA TAGACATTGA CTCAGACAAC
GATGGCATCA TAGATACGAG CGAAACCGTC GCGCAAGACA TCGATGAAGA TAATGACGGT
ATAGCTGATA TCTTCGACCC TGACTTCACT CCAGGAGATG ACAGCAACGC TGACGGAATC
ATCGACAATA TCCAGCTTAC CGATAGTGAC GCTGATAATG TTATTGATAT GCATGACTTA
GACAGTGATA ACGATGGTCT ACTCGATATT AATGAGTCCG GTGGAACCGA TATTAATCAC
GATGGATTAT TTGATGCCAA CAGCACACAG CTCTTAACTC CCACTGACAC AGACTTAGAT
ACTATTCCCG ATTTCATCGA TCTGGACAGT GATAACGATG GCATTATGGA TATCACAAAC
ACTCCCGCTG CCACTTTAGA TAAAAACAGC GATGGACGCA TCGACCTATC AAACGATGAT
GATGCAGATG GCATAGATAA CTCTTATGAC AACATGCCTA ATTGGTTCGG CACCGCTGCC
CCCATAGATC ATGATAATGA CGGCATCCCT TCTGCGTTAG ATAAAGATAA TGATAATGAC
GGACTCTCTG ACATTACCGA AGGTCGAGGC GATTTTGATC AAGATAATGT GGCCGATTAC
TTAGACCGTG ACAGCGACAA TGATGGCTTA TCCGATACAG TTGAAAATAA CTACCCAGCC
CCGATGAATC TCGATCACGA TAAAGATGGT ATCGATAACG CATGGGACGT AGACATCACA
GGTGGTATCG ATACTGATAA CGATGGCATT GATGATCAAT TTACTCCGCT AAATTCAGAT
CTCGACTCTC AGCCAAACCA TCTGGATTTA GACAGTGATA ATGACTCCAT TTCAGATACC
AGAGAGGAGG TGATGATAGC GTTATCTAAA GTAGACAATA ACCAAAATGG AATTGATGAT
ACTGTCGATG TAGAGATCAC CATGGGCGTC GATGAGAACT TCGACGGCAT AGATGACAGC
CTCTTAACCC AAAGCTACAT CGACGATGAT GATATCCCTA ACTTTATCGA TAGCGACAGC
GATAACGATA CTATCCCCGA CAGTATTGAA GGGGATATCG ATTCAGATAA AGATAACTCC
CCCAACTTCA TTGATCTAGA CAGTGATAAC GATGGAATAC CTGATATCGA GGAGGGAGTC
ATAGATACCG ATACTGATGG CATACCAAAC TACCTTGATG ATGATTCCGA TAACGACGGA
ATATTAGACA GAAATGAAAA TGCAGATACA AATCGAGATG GTGTTAATGA TCGCTTACAG
GCCAATACTC CAGTAGAGCT AGTAGGCTCA AGCTCTGGTG CGCTGGGCTT TACCTTAACT
CTAATGTTAG CTCTATTCAT CTTCATCAGG CGCAAAATAT TATGA
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| Protein sequence | MMNETLKPLL NRSIFLMLLC IYSHNLYAEG TYQMDAAHPQ YLETDTLMFV HVDGANKYIR
LHLCRQSNQS GQVYADIYST NLVSGKYVKN AKLADLTSTV GNISCSDPMT NPLPATPSSG
EVMHYQVSSA GVYAVDLSEL FDNYQRWDIS VVDNVGDSVD PMANDGNLFS YLWRFDTPGS
TEPYAADTRM YILAPGGFAN TNYVWAADLQ NFAGDIHKVL SNSIGLNPPY SGTSNSLSFS
IDEKFPTYLS YPKGASPSPA PSSAAQLTDT LSFIDSAGND NEITPNGDTI EDTGTFSFTP
NATGTYAISV AALGGSYQVI LQGEMQQNVT VNHVWDGKDA DGNAMVPAKY DVKLTLKLGE
SHFVVKDVET SGGGTNNGLT ILQATDETTL VGTQVYWDDT PIGGSTNLPS GTLSSLASVG
THRHTWGDFT FTSIGDLNYI DTYVYGLSSD FATEAINVNA SAPTVTSNGG GHEAAIEVNE
GSTLVTNVVA TGGSGSYTYS IFGGDSALFN IDASGELTFL SAPDYETPLD ADTNNDYLLF
VRVDGGGTLE YIHQELTISV NNIPSSTPQS ISVTEDTPTS ITLTAADIDL DTLSYSITNS
PNNGVLSGTL PNLTYTPNSD YNGADTFSFK VNDGFTDSNT ATISINVSPI NDTPSAGSQS
IPVTEDTPTS ITLTATDIDL DSLSYSLLTS PANGSLSGTP PNLTYTPAAN YAGGDSFTFI
ANDGNLISNT ASITITVSAV NDAPTSNNQS ITVTEDTPKT ITLIATDVEA DSLTFSLISS
PSKGVLTGTL PNLTYTPNLN ETGADSFTFK VNDGAIDSNI ATVSININAI NDAPISNNQS
VTVAEDTPKA ITLIATDVEA DSLTFSLISS PSKGVLTGTL PNLTYTPNLN ETGADSFTFK
VNDGAIDSNI ATVSININAI NDAPISNNQS VTVAEDTPKA ITLIATDVEA DSLTFSLISS
PSKGVLTGTL PNLTYTPNLN ETGADSFTFK VNDGAIDSNI ATVSININAI NDAPISNNQS
VTVAEDTPKA ITLIATDVEA NSLTFSLISS ASKGALTGTL PNLTYTPNLN ETGADSFTFK
VNDGALDSNI ATVSINIDAI NDAPISNNQS VTVTEDTPKA ITLTATDVEA SSLTFSVISA
PSKGVLTGTL PNLTYTPNLN ETGADSFTFK VNDGAIDSNI ATVSINIDAI NDAPISNNQS
VTVAEDTPKA IILTAIDVEA GSLTFSVISS PSKGVLTGTL PNLTYTPNLN ETGADNFTFK
VNDGAIDSNI ATVSINIDAI NDAPIAGGQS IEMVQASSIE LQLNATDTEG SPLSYVIVSS
PQNGTLMGSG PNLTYQPTES FSGDDSFTFK ANDTESDSNI ALITILVLPD LDRDGISDSD
DLDDDGDGIL DVIEGDSDSD GDGIPNRLDT DSDNDGIPDS EEGLVDSDGD GIADYLDSSQ
DEDRDGIPDI VEGNFDSDLD GIINYLDIDS DNDGLVDGFE AGISGEDSDN DGIDDLFDVQ
QTKGRDTNND GIDDDIDLID SDSDGKPNYL DIDSDNDWIP DAIEATYARV DLDSDGITDL
YDIDMTQGDD SDGDGIDDRF DIDNTGHFDA DNDGISDAKL EENDNDHDGL ADHIDIDSDN
DGIIDTSETV AQDIDEDNDG IADIFDPDFT PGDDSNADGI IDNIQLTDSD ADNVIDMHDL
DSDNDGLLDI NESGGTDINH DGLFDANSTQ LLTPTDTDLD TIPDFIDLDS DNDGIMDITN
TPAATLDKNS DGRIDLSNDD DADGIDNSYD NMPNWFGTAA PIDHDNDGIP SALDKDNDND
GLSDITEGRG DFDQDNVADY LDRDSDNDGL SDTVENNYPA PMNLDHDKDG IDNAWDVDIT
GGIDTDNDGI DDQFTPLNSD LDSQPNHLDL DSDNDSISDT REEVMIALSK VDNNQNGIDD
TVDVEITMGV DENFDGIDDS LLTQSYIDDD DIPNFIDSDS DNDTIPDSIE GDIDSDKDNS
PNFIDLDSDN DGIPDIEEGV IDTDTDGIPN YLDDDSDNDG ILDRNENADT NRDGVNDRLQ
ANTPVELVGS SSGALGFTLT LMLALFIFIR RKIL
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