| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0561 |
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| Symbol | |
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| ID | 6114795 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 789324 |
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| End bp | 791885 |
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| Gene Length | 2562 bp |
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| Protein Length | 853 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641632047 |
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| Product | Beta-N-acetylhexosaminidase |
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| Protein accession | YP_001758952 |
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| Protein GI | 170724926 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3525] N-acetyl-beta-hexosaminidase |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.910556 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAAGGA CCTTAATGGT AAGCCTACTG GCGATGTCAT CTGCTCATGC CGCAGCACAG
AGCCAGCAAG CTCAAGTCAC TGACTTTGCC AAGCATCTTC AAGTTAGCTA TGAGCTTTTG
AATGCTTCAC CTGAACTTTG CCCTCAAGAG CTGAAAAAAT GTTACTACTC TCGTATCCGC
TTAACCACTA AAGAGCAGTT AAACTTAACT GATTGGAATA TCTACTTTAG CCAGCTCACT
CCTGTGATAG TCAATGAGTC TTCCCAATTC GATATTGAGC ATATTAATGG CGATCTTCAC
CGCATCACAC CCACGGGAGA GTTCAATACC TTTGCTCCCA ACGCTGAATA CTCACTCACC
TTCTATAGTC AAGGAAGCCA GATAACCCGC GCAGAGTTTA TGCCTAACTT CTTCGTTCAC
ACTCAAGGAG GTGAAGCTCA GGTTATCGAC AGCACTAAAA CTAAACTCGA CCCTGAAACC
GGCTTAGAGC TCCAGCCATA CCTTGAGCCG TTTACCGATA AACAGAAACA GTTCAGGGTC
AATAAAAGTG ATAATACCCA GTGGGCCGAC TCCGCCCTCC TCTATCAACA AACTCAATCG
GTATCTGAAA CGATCGATAT TAGTGCCCAA CTTATCCCTC AACCACAATC ACTTATCATC
ACAGATAAGC TGTCTCAAGT GGATCTAACT AAGGGGATCG TGCTTAAAAC AAAAGGAATA
AGTAAGCAGT CACTCACCCC AGCAATCAAT AGATTAAAGC TGTTAGGGGT AGCACAGACC
CCTAACGGAC TAGCTGTATC TGTTAATCTA TCTCCTGAAA AAGGCGCGCA TCTTGAACAC
TACAGGCTAA CCATAGACGC GCAGGGAATA CAGATAGCCG CCCATAGTCA GGTAGGTGCC
TTCTATGGAC TCATCTCGCT GGCAGGACTA ATAGACACAC AGAATTTAAC CCTGCCCTAT
TTAGCAATAG AGGACCAACC CAGATATTCA TTTAGGGGCC TACATATCGA TGTCGCCCGT
AACTTCCTCT CTAAAGATTT TATCTTAAGC ACACTGGATC AGATGGCAGC ATATAAATTA
AATAAACTGC ATCTACACCT TGCCGATGAT GAAGGTTGGC GTCTTGAGAT CCCAGGTTTG
GCCGAACTAA CAAAGGTTGG ATCGAGACGC TGCTTTAATG CACCTGATGA CTGCTTGCTC
CCTCAACTTG GTAGCGATAT CAGTGGCAGT AGTCAGAGTG ACGGCTATTA CAGCGTCGAT
GATTACCTTG AAATTTTGGC TTATGCCAAC GCCCGCCATA TTCAAGTGAT CCCATCCTTA
GATATGCCAG GGCACAGCCG CGCAGCCATT CACTCTATGG AAGCAAGATA CCGTCACTAT
TTAGCCAAAG GTGACCTAAA AGCCGCTGAA CGCTATCGAC TCGTTGAACC TGAAGATAAA
ACCCAATACA GCTCAATACA GCACTACAAA GACAACACAC TGAACGTCTG CTTAGACAGT
ACCTACCTCT TTATCGACAA GGTTATCGAT GAGGTTCAGC AGTTGCATCT ACAGGCAGGC
ACGCCATTAA CCACCTACCA TATCGGAGCT GATGAGACTG CAGGAGCTTG GGTAGACTCA
CCAGCTTGCG ATCAGTTACG CAGTAACTTC AGCGAACAGA TAGCAGGATT ACATAGTTTA
AATGGCTACT TTATTGAGCG GGTTTCAGCC ATGCTAGCTA AAAAGCAGAT AAAAGTGGCG
GGTTGGAACG ATGGCATGGG TGAAACTCGC CCTGATAAGA TGCCCAAGTC GGTGCAAACC
AACTCCTGGT CACAACTCTA TAGCCAAGGC CATATCGCCA CCCATAAACA AGCTAATTAT
GATTGGGATA CCATCATCTC AACACCCGAG GTCACCTACT TCGACTTTCC CTATGAAGCG
CATCCACAAG AGCCTGGAAA CCACTGGGCA GCCAGAAATA TCAGCAGTAG AAAGGTATTC
GAGTTTATGC CCGATAACCT ACCAGCCCAC GCTGAAATTT GGACCGACAT AAACAATCAG
GCATACCGCT CAGACGATAC CACCAATCCA TTAAGGTCAG GGGTAAAATA CCAAGGCCTT
CAAGGCCACC TTTGGAGTGA GATGCTGCGC AGTGATAGAC AAGCTCAATA TATGCTTTTC
CCCCGGCTAT TAGCGCTAGC TGAACGTGCG TGGCATAAAG CTCAGTGGGA GCTCGACTAT
GATCACTCAG GTAAAGTTTA CTCCAGCGAC TCTAAACATT TTACCGAAGA TGCGATATAC
GCAAGAGAGC AGGACTGGCA GAGGTTTGCA TCCGTTTTAG GGCGTAAAGA GCTGCTCAAA
TTGGAAAAAG CGGGGGTGTT TTACCGTATT CCCACTGTCG GAGCTAAGTT CAAAAACGGC
AAGCTAACCA TTAAAACAAT ATTTCCAGGG ATCCCTGTAG AGTATCAAGA AAAGTCAGGT
GAATGGTTGC CATACCAAGT CAATGATGAG GTGACAAAGC CTCTAAAAAT AAGAGCCATG
AGTCAAGACT TGAGCCGAAA AGGCAGAGCA CTGACCCTGT AA
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| Protein sequence | MRRTLMVSLL AMSSAHAAAQ SQQAQVTDFA KHLQVSYELL NASPELCPQE LKKCYYSRIR
LTTKEQLNLT DWNIYFSQLT PVIVNESSQF DIEHINGDLH RITPTGEFNT FAPNAEYSLT
FYSQGSQITR AEFMPNFFVH TQGGEAQVID STKTKLDPET GLELQPYLEP FTDKQKQFRV
NKSDNTQWAD SALLYQQTQS VSETIDISAQ LIPQPQSLII TDKLSQVDLT KGIVLKTKGI
SKQSLTPAIN RLKLLGVAQT PNGLAVSVNL SPEKGAHLEH YRLTIDAQGI QIAAHSQVGA
FYGLISLAGL IDTQNLTLPY LAIEDQPRYS FRGLHIDVAR NFLSKDFILS TLDQMAAYKL
NKLHLHLADD EGWRLEIPGL AELTKVGSRR CFNAPDDCLL PQLGSDISGS SQSDGYYSVD
DYLEILAYAN ARHIQVIPSL DMPGHSRAAI HSMEARYRHY LAKGDLKAAE RYRLVEPEDK
TQYSSIQHYK DNTLNVCLDS TYLFIDKVID EVQQLHLQAG TPLTTYHIGA DETAGAWVDS
PACDQLRSNF SEQIAGLHSL NGYFIERVSA MLAKKQIKVA GWNDGMGETR PDKMPKSVQT
NSWSQLYSQG HIATHKQANY DWDTIISTPE VTYFDFPYEA HPQEPGNHWA ARNISSRKVF
EFMPDNLPAH AEIWTDINNQ AYRSDDTTNP LRSGVKYQGL QGHLWSEMLR SDRQAQYMLF
PRLLALAERA WHKAQWELDY DHSGKVYSSD SKHFTEDAIY AREQDWQRFA SVLGRKELLK
LEKAGVFYRI PTVGAKFKNG KLTIKTIFPG IPVEYQEKSG EWLPYQVNDE VTKPLKIRAM
SQDLSRKGRA LTL
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