| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0560 |
|---|
| Symbol | mepA |
|---|
| ID | 6114794 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | + |
|---|
| Start bp | 788475 |
|---|
| End bp | 789311 |
|---|
| Gene Length | 837 bp |
|---|
| Protein Length | 278 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641632046 |
|---|
| Product | penicillin-insensitive murein endopeptidase |
|---|
| Protein accession | YP_001758951 |
|---|
| Protein GI | 170724925 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3770] Murein endopeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAAAT ATCTACTTCT CCTGTGCGTC TTGTATCTGA TTTTGGGTTT TGCTGCATCG
GCTAACCCTT GGGCGCGAGT GGAGCAGCCC TTTACTGGAA GTTCTGATGC GATCGGTAGT
TACTCCAATG GTTGCTTATC TGGCGGAGTA GGGCTGGCGA GTGAGGGAGA GGGGTTTCAG
GTGATCCGCA CTTCACGCAA AAGATACTAT GGTCATGCAG ATCTGGTGAA CTTTATTAAT
GAGTATGCTG CAACACTTAA GCAAGCTGGT TTAGATGATC TGCTTATCGG TGATATGTCT
ATGCCTAGAG GCGGTCATTT TACTTCTGGA CATAGAAGTC ATCAGATAGG TCTAGATGTG
GATATCTGGT TACGTCAGGC CAATAGGAAA TTGACCGCGC AAGAGATTGA AAATCCTAAG
AAGTTGGATG TTGTTAATCG AAAAGCCTTT AAGGTGAATG CAAACTGGTC CGGTGCACAT
GGGGTGATGA TACGCCTAGC GGCATTAGAT AAGCGAGTTG CCCGTATTTT TGTCCACCCA
GTGATTAAAC AGCAACTGTG TAGCCAAGCG GAGCAGGGGA GTTCTTGGTT ACAGAAAGTG
CGCCCTTGGT GGGGGCACTC ATCTCATATG CATATTAGAC TCAAGTGTCC TGATAATAGT
CAACTGTGTG AGGGGCAAGA CCTGCCACCT GAGGGGGATG GCTGTGATGA GCTTAGCTGG
TGGCAGGAGC AGATGAGTGC GCCGAAAAAA GTGAACAATA GTGAAAAGAA ACCTAAACCC
AAACCTAAAA AGAGGAAACC CATGCAGTGT ACCCCTCTGT TAGGTTCAGG TCTGTGA
|
|---|
| Protein sequence | MAKYLLLLCV LYLILGFAAS ANPWARVEQP FTGSSDAIGS YSNGCLSGGV GLASEGEGFQ
VIRTSRKRYY GHADLVNFIN EYAATLKQAG LDDLLIGDMS MPRGGHFTSG HRSHQIGLDV
DIWLRQANRK LTAQEIENPK KLDVVNRKAF KVNANWSGAH GVMIRLAALD KRVARIFVHP
VIKQQLCSQA EQGSSWLQKV RPWWGHSSHM HIRLKCPDNS QLCEGQDLPP EGDGCDELSW
WQEQMSAPKK VNNSEKKPKP KPKKRKPMQC TPLLGSGL
|
|---|
| |