Gene Swoo_0529 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0529 
Symbol 
ID6114763 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp744541 
End bp746445 
Gene Length1905 bp 
Protein Length634 aa 
Translation table11 
GC content41% 
IMG OID641632016 
Productpeptidase S9 prolyl oligopeptidase 
Protein accessionYP_001758921 
Protein GI170724895 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGAA TATTTATCGC TTTATTGTTG ATTTTATCTA GTGCTGCTGT TCACGCTGAA 
CAGCTCCCAG TTGAAGCGTT TGGTCTGTTA CCACAATCTG AACAGGTAAA GCTGTCACCA
GATGGGGATA AACTGTCTTT CATTATCCAC AATCAGGGTA ACACCTATAT TGGTGTTAAA
GATTTTAAAG CTGATGCAAC TAAGTACGTA GTGAGTACGG ATAACCAAGA GTTTAAAATA
GGCTGGTATA GGTGGGCTAA TAATGAACTT TTACTTGTTA GTGCAGATTA TCCCGTAAAG
CAAAGAGGGA TAAAATACAC AGAAACTCGA CTTCTTAAAG TGCATGCTGA TGGTAGTGGT
AAACTGAAAA CCGTTATGAA ACCGAAAAAG AGGGAGCTAA ACCCTCAGTT TCAAAATGGC
ATTATCGATC TGCTGCCCGA TGAACCCGAT TATATTTTAA TGGGACTTGC ACTGAAAGTC
GCAAATCGTC CTGATGTTTA TAAGATTAAT TTAAACTCTG AACGAAAGCG CAAGCTTTTA
CAAAGAAGTC GTTCAGACAT TCACAGTTGG CTAACCGACC AACAGCATAG AGTCAGGCTA
GGTTATGGCC GGGATGAGAC CAAAATATTT TATCGTCTCT ATGATTTAGC AACTGATGAA
TGGCGTAACA TTTGGGAGTA TGAGATCTTT GATGCGCCTG ATATTACGCC GTTAGGGTTT
GGCCTAAATC CATCCGAACT CTATATTCGA GCGATACATA ATGACAGGTA TGCCATCTTT
AAGGTTGATG TTACCGATAA GAAACTGACA AAAACCTTAG TCTATGCCGA TGAACATTAT
GATATCGAAG GTTCATTAAT CTACTCACGT AAAACCAAGG ATGTGATCGG GGTTTATCAT
GGTGAAGCCA ACAACGCTAA GGTCTACTTT GATCCTGCTT ATGAGCGCTT TCAAAAGTCG
TTAAACAAGG CGATTCCCGA TGCCTATAAT AATATCGTCA GTGTGAGTGA TGACGAAAAT
ATGTATGTGT TATATACCAG TAACCCGCAG ACTCCAGGTG CTTACTATTT AGGAGATAGA
AAAGCGAAAA CATTAGAGTT CATTATTGAT GAATATCCTT TTCTACTCCA AAAAAACTTA
TCTGATAAAA GAAAAGTCAG CTATCAAGCT CGTGATGGTT TAAGCATTGA GGCCTATGTG
ACCCCGCCCT ATGAAGGTGT AGAGTCTAAA AAGGCGGCAC TAGTTATCCC CCATGGGGGC
CCAATGGTAC GAAACTATGG CGGTTTCGAT TGGTTCTCTC AATTTTTTGC CAGCCGTGGT
TATACCGTGA TTGAGCCTAA CTTTCGCGGC TCATCAGGGT ATGGTTTTGA GTTTGAGATG
GCCTCGATTC AAAAGTGGGG CGGAGCGATG CAGGATGACC TTGCCGATGC CGCTAAATGG
CTGACTAAGA ACTATCCAGT AGATAAAAAT AAGGTATGTA TTCTTGGCGC CAGTTATGGA
GGTTATGCGG CGATGATGGC TGCGGTGAAA CAGCAAGATG TTTTTCGTTG TGCAGCCAGT
TTTGCAGGGG TATCGGATCT TGAGTATATC GTGCGAAAAG CAAAACGATT TACTAACTAT
AAGGTGGTGA AGAAACAGAT AGGTGATGAT TCAGATATGT TAGAGCAAAA GTCACCGGTT
AACTTCGCTA AAGAGATCAA TATCCCACTG CTGCTCATTC ACGGCGATAA AGACAGGGTT
GTCGATGTTT ACCATAGCCG TGAGATGTTT GAGGAGCTTG AAGATCTGGG TAAAGTAGTT
GAATACATCG AACTTGAAAA TGGCAACCAC TATCTGGAGA TCGAGAAGAA TAGACTCAAG
ACTTTAAATG CGTTTGATAA GTTTCTGACT CAGCATCTTA ACTAG
 
Protein sequence
MSRIFIALLL ILSSAAVHAE QLPVEAFGLL PQSEQVKLSP DGDKLSFIIH NQGNTYIGVK 
DFKADATKYV VSTDNQEFKI GWYRWANNEL LLVSADYPVK QRGIKYTETR LLKVHADGSG
KLKTVMKPKK RELNPQFQNG IIDLLPDEPD YILMGLALKV ANRPDVYKIN LNSERKRKLL
QRSRSDIHSW LTDQQHRVRL GYGRDETKIF YRLYDLATDE WRNIWEYEIF DAPDITPLGF
GLNPSELYIR AIHNDRYAIF KVDVTDKKLT KTLVYADEHY DIEGSLIYSR KTKDVIGVYH
GEANNAKVYF DPAYERFQKS LNKAIPDAYN NIVSVSDDEN MYVLYTSNPQ TPGAYYLGDR
KAKTLEFIID EYPFLLQKNL SDKRKVSYQA RDGLSIEAYV TPPYEGVESK KAALVIPHGG
PMVRNYGGFD WFSQFFASRG YTVIEPNFRG SSGYGFEFEM ASIQKWGGAM QDDLADAAKW
LTKNYPVDKN KVCILGASYG GYAAMMAAVK QQDVFRCAAS FAGVSDLEYI VRKAKRFTNY
KVVKKQIGDD SDMLEQKSPV NFAKEINIPL LLIHGDKDRV VDVYHSREMF EELEDLGKVV
EYIELENGNH YLEIEKNRLK TLNAFDKFLT QHLN