| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0516 |
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| Symbol | |
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| ID | 6114750 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 730631 |
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| End bp | 733360 |
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| Gene Length | 2730 bp |
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| Protein Length | 909 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641632003 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001758908 |
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| Protein GI | 170724882 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0428705 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTTTA ATCGATTAGC CAAGTTAGTT AGCTTGGCAT CTAGTGGCAT AGTAGCTCTT
TCGGCGCCGA GTTACGCTGT AGAGTCAAAT GAAGAGAGTG TTGAACGTAT TGAGGTCACA
GGCTCTAGAC TAAAACGTGT TGATATGGAG GGGGCAAGTC CTGTCACGAC CATTACCGCT
GAGGAGCTTG CGAAATCAGG TTTTGCAACT GTGGGTGATG CACTTCGTAG CTCAAACCTT
AATGCATTCG GTTCTTGGGG CGGTGGGTCC AATAATGGTT GGGGCTCACA GGCGACAGTT
CAGTTAAAAG GTGCTTCAGC CTTCCATACT CTGACGCTAT TAGATGGTAA GCGGATGGCT
AAGTCTCCAG TCATGGACGG CGGTGCAGCT AATATTAATA CCATTCCTAT GGCGGCGGTT
GAACGGATTG AAATTCTTAC CGATGGTGCA TCGGCGATTT ATGGTACCGA TGCCATTGCT
GGTGTTGTAA ATATTATTCT TAAGAAAGAT TTCGAAGGTG TGCAGCTCGA TGCCAGAATG
GATCGCCCTA CACAGGAGGG GGGAGATTCC TCAAATCTTT CGTTTACTGG TGGCTTGAAT
TCAGACAAAG GCCATTTAGT TTTCACATTT GAGCATTATG AATCGCAAAA AATCCTGCAA
AAGGATCGTT GGTACACTCA GCCATTTGTC CAAGAGGGTG GCGATCCTAG TGACTATCAA
GACTGGGTGA ATATTAGTCC TACAGGCCGT GTATTAACAC AAGGTGGCGC TGGTGGCTGG
GTATACTCTA CTCCTTTTTC AAATAGTGAT AAGAGCTGCG CCGATGTCTA CGGTGATGCA
TTTATTGGAT CATTAGATGA CAGTGATTAT CCTGGTGATA CGCTTTGTGC TTATGATTAC
ACTCAAGCTG CCGCAACCTC TGTTGGCCAG ACCCGTAACA ATACCCTGCT GCATTACACC
TATGAATTGA GCGATAGTAT TGAGTTAACT GCACGTGCGT ATTGGGCTGC AAATGAAACA
CAAGACGTAT CGGCGCCAGT CCCTGCATCA ATTAGCATTC CAAATGGTTT ACCCGCTTAC
ACTACTGCAG AAGGCTTAGA TCTTGTTGAG TTAGTTGCCG ATCCAAATGC TGGTATGAAT
TTCCGTTTTG ATACCGCGGG CGATCGTGTT GCTGAGCACC ATGATAATAT TTTTGACTAT
CTATTAGCCT TAGATGGCAC GACCGATTTT ATGGATTGGG ATATTGCTGT TAATTACAAT
AAATATGATA ACTACACTTG GGGAACGGGT TATCAACTTA AGGGAGCGAC CACGGATTTA
GTGGGTGAGT GGGATGATGA ATCAAACTCA TTTGTTGGTT GGGATCCACG GGATCCAAAC
TCTGAAATGC CAGCTGGGGC AACGGCTAAT TACGATAAGC GTATGTCCGC ATCTTATCTG
GATATAAGTG GTGGCGCGGC TTTTGAGCTG TTTGAATTAC CAGGTGGTGA CGCCAATATG
TACATTGGTG GTTCATACCG CGAAGAGAGT CTAGATTCTA AGGTGTCAGC TCTAGCCGAG
GCGGGTCAAA TCGTTGGAGG GAATGGCGGC TCAGGTGGTG AAGGTGAGCG TGATGTCATG
GCAGCGTATT TTGAGTTTGC TATGCCTGTG ATGGATAATT TAGAGCTAAA CCTTGCTGGC
CGTTATGATG ATTATTCTGA CTTTGGTGGT ACGTTTAACC CGCAAGTGTC AGTGCGTTAT
AACATTATCG AGCCTCTACT TATTCGTGCC TCTTGGGGAA CTGGTTTTCG TGCTCCAACC
TTGTCAGACC TATACCAAGG GACGTCAGAA GGTTTTGGTT ACATGAAAAA CTACCTGAAC
TGTTACGATC AAGGTGAGTC TATAGATAAC TGTGACCGTT GGGATTATGG GCCAACACGT
ACGGGTGGGA ATGTAGATCT AAAGCCTGAA GAGTCTGAAT CATATAACTT AGGGATCGTT
TGGGATATTA CAGAGAGTGT TAATGTCTCT GTGGATTACT GGTCTCTGGA AACAACGAAC
TTAATCGATA GCTTAGGTGC AAGTGAGATC ATTAAGACAC AAGCTAAGCT TTGGGAAGCT
GCCGACGCCG CAGGTGTTGC ACGCCCTGAT GTTTCAACTG TCTATCCTGG CACAGAGATT
AGTCGCTTAG GGAATGGCAA GATTGATTAT GTTGTCAGTC AAAAGCTGAA TGTTGGTTTA
AGTGAGCGTG AAGGTATAGA TGTAAAAGTA GGAGCTGGAT TTGAGTCTGA ATTTGGTGAC
TTTAAGTTTG GCTTAGGGTG GTCATATTTC TTGAAGTATA AGTCATCGTA TTCCGAAGCT
GGTGTACAAG TTATTAGTGA TGATGAAGCT GGCCGTGAAG ATACACCTGC ACACAGAGTG
AACTTAACTG CTGATTACCT CTTAGGTGAT CACTCTATCA GCTACTATGG TAACTTTATC
GGCTCTCAAG AGAGCTGGGA TGTTATAGAG GGGAGCTGGG ATCCAGATGC AGGGGAGACT
GCAGATGACG GCACTCTTTA TGAGATCGAC TCAGTGATGT ATCACAATTT GACCTACACC
TACACTCTGC CTTGGAGCAA TAGCTTCTCC TTGGGTGTGA CCAATTTGAC TGACGAAGAA
CCTAAGTTTG ATTACAATGG AACCTATGAG GGCAACTTGT ATGACATACG TGGCCGCACT
TACTGGGCTG GTTTTAGACA ATCATTTTAA
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| Protein sequence | MKFNRLAKLV SLASSGIVAL SAPSYAVESN EESVERIEVT GSRLKRVDME GASPVTTITA
EELAKSGFAT VGDALRSSNL NAFGSWGGGS NNGWGSQATV QLKGASAFHT LTLLDGKRMA
KSPVMDGGAA NINTIPMAAV ERIEILTDGA SAIYGTDAIA GVVNIILKKD FEGVQLDARM
DRPTQEGGDS SNLSFTGGLN SDKGHLVFTF EHYESQKILQ KDRWYTQPFV QEGGDPSDYQ
DWVNISPTGR VLTQGGAGGW VYSTPFSNSD KSCADVYGDA FIGSLDDSDY PGDTLCAYDY
TQAAATSVGQ TRNNTLLHYT YELSDSIELT ARAYWAANET QDVSAPVPAS ISIPNGLPAY
TTAEGLDLVE LVADPNAGMN FRFDTAGDRV AEHHDNIFDY LLALDGTTDF MDWDIAVNYN
KYDNYTWGTG YQLKGATTDL VGEWDDESNS FVGWDPRDPN SEMPAGATAN YDKRMSASYL
DISGGAAFEL FELPGGDANM YIGGSYREES LDSKVSALAE AGQIVGGNGG SGGEGERDVM
AAYFEFAMPV MDNLELNLAG RYDDYSDFGG TFNPQVSVRY NIIEPLLIRA SWGTGFRAPT
LSDLYQGTSE GFGYMKNYLN CYDQGESIDN CDRWDYGPTR TGGNVDLKPE ESESYNLGIV
WDITESVNVS VDYWSLETTN LIDSLGASEI IKTQAKLWEA ADAAGVARPD VSTVYPGTEI
SRLGNGKIDY VVSQKLNVGL SEREGIDVKV GAGFESEFGD FKFGLGWSYF LKYKSSYSEA
GVQVISDDEA GREDTPAHRV NLTADYLLGD HSISYYGNFI GSQESWDVIE GSWDPDAGET
ADDGTLYEID SVMYHNLTYT YTLPWSNSFS LGVTNLTDEE PKFDYNGTYE GNLYDIRGRT
YWAGFRQSF
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