Gene Swoo_0515 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0515 
Symbol 
ID6114749 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp729274 
End bp730209 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content46% 
IMG OID641632002 
ProductPpx/GppA phosphatase 
Protein accessionYP_001758907 
Protein GI170724881 
COG category[F] Nucleotide transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0248] Exopolyphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0265518 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAACAA CACCTCTTTA TGCGGCGATC ACATTAGGAT CGAATAGTTT CAATATGTTG 
GTTGCCAAAA CACTTGGTGG CCGACCTGAA ATTATCGCGA AATATAAGCG AAAAGTCCGG
CTTGCTGAAG GGATCCAAAG TGATGGTTCC CTGAGTGAAG AGGTGATGTT GCGTGGCCTT
GATTGCTTAT CTATGTTCAG TGACATGCTG AAGAAAGAGG GCGTATCAGT AGATAATATC
GCCGTTATTG CCACTGCAAC CCTTAGACAT ATTGCTAATT CCGATGAGTT TTGTCGTCGA
GCCCTTCCCA TTTTAGGTCA CCCAATCGAG ATCATCTCCG GCATGCGTGA AGCTGAGTTA
ATCTACCAAG GTATGGTTGC TACTACTGAG GGAGAGGGGC GCCGCCTAGT GATTGATATT
GGTGGCGCGA GCACTGAGTT TATTATCGGT GACGGCGATA AGGTGCTGTT GAAAACCAGT
CTACCTATGG GCTGTGTTAC CTTTAATGAT AAGTTTTTTA CCTCTTTTCC CTTCCAGAAA
TTAGATTTTG ATGATGCTAA AGCAGCGGTA AAGTCTGCCC TGGGTGATTA TCTGAGTGAG
CTTAAGCACT TAGGTTGGCA CTGTGTTGTA GGCGCTTCTG GCAGTGTGCA ATCAGTGGTG
GAACTGCTTA ACTATAGGCA AGAGCCAGCT AGCATCACAT TAGATGTATT GACCTCACTG
CAAGAGGAGG TGTTAACCCA ATCTAGCCCC TCTATGTTAT CTATTTCTGG CCTTCATCAG
GAGAGAGCGC CAACTTTTGC TGCTGGGATC TCAATCTTGC TTGCCCTGTT TGAACTGTTA
GAGATTGAGA GTTTGAACCT ATCTGGCGGT GCCCTCAGAG AAGGGGTATT GCAGACATTA
GCTCAACGTA TTGAGCAGGT TGCTGACAGT GCCTAA
 
Protein sequence
MPTTPLYAAI TLGSNSFNML VAKTLGGRPE IIAKYKRKVR LAEGIQSDGS LSEEVMLRGL 
DCLSMFSDML KKEGVSVDNI AVIATATLRH IANSDEFCRR ALPILGHPIE IISGMREAEL
IYQGMVATTE GEGRRLVIDI GGASTEFIIG DGDKVLLKTS LPMGCVTFND KFFTSFPFQK
LDFDDAKAAV KSALGDYLSE LKHLGWHCVV GASGSVQSVV ELLNYRQEPA SITLDVLTSL
QEEVLTQSSP SMLSISGLHQ ERAPTFAAGI SILLALFELL EIESLNLSGG ALREGVLQTL
AQRIEQVADS A