| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0514 |
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| Symbol | |
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| ID | 6114748 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 727936 |
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| End bp | 729261 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641632001 |
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| Product | ATP-dependent RNA helicase RhlB |
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| Protein accession | YP_001758906 |
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| Protein GI | 170724880 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0317755 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAAA CACATTTATC AAATCAAAAG TTTGCCGACT TTTCTCTGAA TAAAGAGATA
AAAACAGCAC TAAACGAGAG CGGTTTTGAA TTTTGCACAC CTATTCAAGC CCTATCTTTA
CCTATTCTAT TACAGAAAAA AGATATTGCT GGCCAAGCCC AGACCGGAAC AGGCAAAACA
TTAGCCTTTC TTGTTGCGAC ATTTGACCAT CTTCTTTCTA CTCCCGTTCC TGAAGGACGC
CAACTTAATC AGCCTAGAGC GATGATTATG GCGCCAACCC GTGAATTGGC TATTCAAATA
GCTAAAGATG CGACGCTTCT TGCTAAGCAT ACAGGCCTGA AGGTCGGTAT TGTCTACGGT
GGCGAGAGTT ATGATGTTCA GCGTAAGGTG CTGGACAAAG GTGTTGATAT TCTTATCGGC
ACTACGGGTC GTATTATTGA TTATGTTCGT CAAGGGATCA TCAATCTTAG TGCTATTCAA
GCGGTTGTTC TCGATGAAGC CGATCGCATG TTCGATCTCG GTTTTATTAA AGATATTCGT
TTTCTTTTCA GACGTATGCC AGATGCTAAA TCGCGTCTGA ATATGCTGTT TTCTGCCACT
CTTTCAATGA AGGTGCAGGA GCTAGCTTAT GATCATATGA ATGAGCCTGA GAAAGTGGTT
ATCGCACCTA ATGAAAAAAC CTCTAAAAAT ATCAAAGAGG AGATCTTCTA TCCATCGATG
GATGAGAAGA TGCGTCTGCT GCTTTCTTTG ATTGAGGAAG ATTGGCCAGA AAAAGCGATT
GTATTTTCTA ATACCAAACA CAGCTGTGAA AATGTTTGGT CATGGTTAGA AGGTGACGGG
CACCGAGTTG GTTTGTTAAC TGGCGATGTA CCGCAAAAGA AGCGTATTCG TATTCTTGAG
CAGTTCACCG AAGGTAAGCT AGATATACTG GTTGCAACAG ATGTAGCTGC GCGTGGCCTG
CATATCTCTG ATGTGTCTCA TGTGTATAAC TATGATCTGC CCGATGACTG TGAAGATTAC
GTGCACCGTA TTGGTCGTAC AGGTCGAGCG GGTAAGAAAG GGGTATCAGT TAGCTTTGCA
TGTGAAGAGT ATGCACTTAA CCTCCCTGCT ATCGAAGAGT ACATTACCCA CTCTATCCCT
GTGACTAACT ATGACAGTGA AGGATTGCTG GATGATATTC CTGCACCAAT TCGTGTCCAT
AGAAAACACA ATAATCGTCC GCAACAGGGC CGTAATAACT CTGGTCGTCC TCAGGGACGA
AATGGCAATC GTGCAGGTGG CCGAAATGGT CCACGTCGTC ATGATCAAGT ACGTAGGCAC
TCTTAA
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| Protein sequence | MSETHLSNQK FADFSLNKEI KTALNESGFE FCTPIQALSL PILLQKKDIA GQAQTGTGKT
LAFLVATFDH LLSTPVPEGR QLNQPRAMIM APTRELAIQI AKDATLLAKH TGLKVGIVYG
GESYDVQRKV LDKGVDILIG TTGRIIDYVR QGIINLSAIQ AVVLDEADRM FDLGFIKDIR
FLFRRMPDAK SRLNMLFSAT LSMKVQELAY DHMNEPEKVV IAPNEKTSKN IKEEIFYPSM
DEKMRLLLSL IEEDWPEKAI VFSNTKHSCE NVWSWLEGDG HRVGLLTGDV PQKKRIRILE
QFTEGKLDIL VATDVAARGL HISDVSHVYN YDLPDDCEDY VHRIGRTGRA GKKGVSVSFA
CEEYALNLPA IEEYITHSIP VTNYDSEGLL DDIPAPIRVH RKHNNRPQQG RNNSGRPQGR
NGNRAGGRNG PRRHDQVRRH S
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