Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_0513 |
Symbol | |
ID | 6114747 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 727434 |
End bp | 727760 |
Gene Length | 327 bp |
Protein Length | 108 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 641632000 |
Product | thioredoxin |
Protein accession | YP_001758905 |
Protein GI | 170724879 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3118] Thioredoxin domain-containing protein |
TIGRFAM ID | [TIGR01068] thioredoxin |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00420648 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCGACA AAATAGTACA TCTAAGTGAC GACAGCTTTG AAAATGACGT AATCAACTCA ACACTACCTG TAGTCGTCGA CTTTTGGGCT GAGTGGTGTG GACCATGCAA AATGATTGCG CCTATCTTAG ATGACGTTGC TGAAGAGTAC GAAGGCAAAG TGACTATCGC CAAGATGAAT GTTGACCAGA ACAGTGTTTC ACCTGCTAAA TATGGTGTTC GTGGTATTCC AACACTACTG ATTTTCAAAA ATGGTGAACT TGCGAGTACT AAAGTTGGCG CACTTTCAAA AACTCAACTT AAAGAGTTCA TTGACGCACA ACTATAA
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Protein sequence | MSDKIVHLSD DSFENDVINS TLPVVVDFWA EWCGPCKMIA PILDDVAEEY EGKVTIAKMN VDQNSVSPAK YGVRGIPTLL IFKNGELAST KVGALSKTQL KEFIDAQL
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