| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0509 |
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| Symbol | |
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| ID | 6114743 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 722081 |
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| End bp | 724105 |
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| Gene Length | 2025 bp |
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| Protein Length | 674 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641631996 |
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| Product | fumarate reductase flavoprotein subunit |
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| Protein accession | YP_001758901 |
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| Protein GI | 170724875 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.745873 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000923774 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | GTGAAACTGA TATATACGGA TTCTTTGGTG GTCGGCGCTG GTTTAGCGGG CTTGCGGGTC
GCGATAGCCT CGAAAGAGCG TGGGTTAGAT ACGGTCGTCC TGTCACTGAT CCCTGCTAAA
CGTTCCCACT CAGCAGCTGC TCAAGGCGGC ATGCAGGCGA GCTTAGGCAA TACCATTAAG
GGGATGGGGG ACGACGAAGA TGTCCACTTT CAAGATACTG TAAAGGGTTC TGACTGGGGC
TGCGATCAAG ATGTCGCGCG TATGTTTGCT CACTGTGCGC CAAAAGCGGT ACGTGAACTC
ACCAACTGGG GAGTGCCATG GACTCGGGTG ACTAAAGGGC CACGTCAGGT GGTGGTTAAT
GCCGAGAAGG TCACTATCGA AGAGGCGGAA GAGGCTCATG GACTCATTAA TGCCCGTGAC
TTTGGTGGCA CTAAAAAGTG GCGTACCTGC TACACGGCTG ATGGTACAGG GCACTCGCTG
CTTTATGCGG TGGATAATAA GGCTATCTCG TTAGGTATTC CCGTGCATGA ACGGGTCGAA
GCTCTCTCTA TTATTCATGA TGGTAAGCGT TGCCAAGGCG TGGTTGCACG CTGTTTAATC
ACAGGTGAGT TAAGGGCATA TATTGCTAAA TCCACCACGA TTGCCACCGG TGGTTATGGC
CGCATTTATG AAGTCTCAAC CAATGCCATT ATCTGTGAAG GGATAGGCCA GGCGCTCGCG
CTGGAAACTG GTGTCGCTAA GCTTGGCAAT ATGGAAGCGG TGCAGTTTCA TCCAACGGCT
ATTGTGCCTG TTGGGATCTT AACGACAGAG GGTTGTCGTG GTGATGGTGG TCTGCTGCGT
GACAAAGATG GTCACCGTTT TATGCCAGAT TATGAGCCGG AGAAAAAGGA GCTTGCCTCA
CGTGATGTAG TGTCTCGTCG AATGACCGAG CATATGCGTA AAGGTAAAGG TGTCGACAGC
CCTTATGGCC CACATCTATG GCTCGATATT ACCTTGCTTG GACGTAAACA TGTGGAGACC
AATCTGCGTG AGGTTAAGGA GATCTGTGAG AATTTCTTAG GGATAGATCC CGCTAAGGAT
TGGATCCCAG TGCGTCCGAC TCAGCACTAC TCAATGGGCG GTATTCGAAC CGATAAGACA
GGACAAAACC CACAGCTTAA AGGTTTGTTT AGTGTCGGCG AAGCGGCATG TTGGGATATG
CATGGTTTTA ATCGGCTCGG CGGTAACTCC CTAGCGGAGA CCGTTGTTGG CGGGATGATT
ATCGGTAAAT ATGTTGCCGA TTTTTGTCAG GAAAACAGCT TAGAGATCGA CACCGGGTTA
GCTGAGTCTT TTGTCGAGAA GCTAGGTAGC GAAATTGATG AGCTTATCGA CGGTGACGGC
ACGGAAAGTC CATTTGCGCT TAGGAAAGAG ATGGAGCGTG TGATGATGGA CTATGTGGGG
ATCTTCCGTA ACGGTCCTGA GCTTGAAAAA GCGGTAACAG AGCTTCAGGC ACTACTAAAG
CGCTCACGTA ACATTGGTCT TAAATGCAAA AAGCGTCACG CAAACCCTGA GCTAGTTGAG
GCGTTAAGAG TGAAGCGTAT GCTCAAAGTT GCTCTGACCG TCGCTTGTGG CGCGGCAGCA
CGAACAGAGA GTCGCGGAGC CCATGCTCGT GAAGACTTCC CTCAGCGTAA CGATAAAGAT
TGGCTAAACC GCACTTTGGC AAGTTGGCCA GATGAGCATG CACTCTCTCC TGAGCTGAGC
TATGAGCAGC TTGATGTGAT GAAGATGGAG TTGCCACCGG GATACCGAGG TTACGGCATT
AATAATGCGA TAGCCCATCC TGATACTGAG AAGCGCGAGC ATGAGATCAC TGAAATTTTA
AGTCAACTTG GTGATGATGC CGATCGCCAT CAGCGTCAGC ATGCCTTGAT GCCATTTGAA
GTGCCTGAAT CATTGATGCC TAAGAATGAA CGGCTGTGTG ACACATTAGA TAGACCTACT
CCCCCTGTAG TGGGTGAAGA GTCCGTAGGA GAGCAAGCGT TATGA
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| Protein sequence | MKLIYTDSLV VGAGLAGLRV AIASKERGLD TVVLSLIPAK RSHSAAAQGG MQASLGNTIK
GMGDDEDVHF QDTVKGSDWG CDQDVARMFA HCAPKAVREL TNWGVPWTRV TKGPRQVVVN
AEKVTIEEAE EAHGLINARD FGGTKKWRTC YTADGTGHSL LYAVDNKAIS LGIPVHERVE
ALSIIHDGKR CQGVVARCLI TGELRAYIAK STTIATGGYG RIYEVSTNAI ICEGIGQALA
LETGVAKLGN MEAVQFHPTA IVPVGILTTE GCRGDGGLLR DKDGHRFMPD YEPEKKELAS
RDVVSRRMTE HMRKGKGVDS PYGPHLWLDI TLLGRKHVET NLREVKEICE NFLGIDPAKD
WIPVRPTQHY SMGGIRTDKT GQNPQLKGLF SVGEAACWDM HGFNRLGGNS LAETVVGGMI
IGKYVADFCQ ENSLEIDTGL AESFVEKLGS EIDELIDGDG TESPFALRKE MERVMMDYVG
IFRNGPELEK AVTELQALLK RSRNIGLKCK KRHANPELVE ALRVKRMLKV ALTVACGAAA
RTESRGAHAR EDFPQRNDKD WLNRTLASWP DEHALSPELS YEQLDVMKME LPPGYRGYGI
NNAIAHPDTE KREHEITEIL SQLGDDADRH QRQHALMPFE VPESLMPKNE RLCDTLDRPT
PPVVGEESVG EQAL
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