| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0483 |
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| Symbol | hemC |
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| ID | 6114717 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 669905 |
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| End bp | 670834 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641631971 |
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| Product | porphobilinogen deaminase |
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| Protein accession | YP_001758876 |
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| Protein GI | 170724850 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0181] Porphobilinogen deaminase |
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| TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCAAA ACGTCATTCG TATCGCTACA CGTAAAAGCC CGCTTGCACT ATGGCAAGCT
GAATTTGTAA AAGCTGAACT TGAAAAGTTT CACCCAGATC TCACGGTAGA ACTTCTGCCT
ATGAGCACTA AAGGTGACAT TATCCTTGAT ACACCTTTAG CAAAAGTTGG TGGTAAAGGT
CTGTTTGTTA AAGAGTTAGA AGTTGCAATG CTTGAAAATA GAGCCGATAT TGCCGTTCAC
TCTATGAAAG ATGTACCAGT AGATTTCCCT GAAGGTCTTG GTCTAGAGAT CATCTGTGAG
CGTGAAGATC CTCGTGATGC ATTCGTCTCT AACAACTACA AGAGCATCAG TGAGCTTCCA
AAAGGTGCTG TTGTTGGTAC ATCTAGCCTA CGTCGTCAAT GCCAAATCAG AGCAGCGCGT
CCAGACCTTC AGATCCGCGA TCTACGCGGA AACGTGGGGA CTCGTTTAGG TAAACTAGAT
GCTGGAACCT ATGATGCCAT CATTCTAGCA GCTGCAGGTC TTAAAAGACT TAAGCTCGAA
GAGCGCATCA CTAGCTTTAT TTCAGCTGAA GAGTCGCTGC CAGCGAATGG TCAAGGTGCT
GTTGGTATTG AGTGCCGCAC AGATGATGAG CGTGTAAAAG CGCTATTAGC ACCCCTTGAG
CATGCAGAAA CACGTTTTCG CGTGATCGCA GAGCGCGCCA TGAATACGCA CCTTGAAGGT
GGTTGCCAGG TTCCAATTGG AGCCTACGCA GAGATAGTTG ATGATACGCT AACCCTTCGC
GGTTTGGTCG GTAACCCAGA TGGTACTCAG ATCATTGCAT CAACCAAAGT AGGGCCTAAA
ACCGATGCAA AAGCATTGGG GATCTCCCTT GCCGAAGAGC TCTTAAGCAA AGGTGCTAAA
ACCATTCTCG ATGCTGTTTA CATTAAGTAG
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| Protein sequence | MSQNVIRIAT RKSPLALWQA EFVKAELEKF HPDLTVELLP MSTKGDIILD TPLAKVGGKG
LFVKELEVAM LENRADIAVH SMKDVPVDFP EGLGLEIICE REDPRDAFVS NNYKSISELP
KGAVVGTSSL RRQCQIRAAR PDLQIRDLRG NVGTRLGKLD AGTYDAIILA AAGLKRLKLE
ERITSFISAE ESLPANGQGA VGIECRTDDE RVKALLAPLE HAETRFRVIA ERAMNTHLEG
GCQVPIGAYA EIVDDTLTLR GLVGNPDGTQ IIASTKVGPK TDAKALGISL AEELLSKGAK
TILDAVYIK
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