Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_0482 |
Symbol | |
ID | 6114716 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 669164 |
End bp | 669895 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641631970 |
Product | uroporphyrinogen III synthase HEM4 |
Protein accession | YP_001758875 |
Protein GI | 170724849 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1587] Uroporphyrinogen-III synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACTAT TACTGACGCG GCCAAAAGGC CGCAATCAGT CGATGTCAGA GGCCCTAACT CAACTTGGGG TCCCTTACAT CATTACGCCT TTACTGGAAG TTCAGGCAAG TAAAACTCAC CAAGACCAAG ATGCTATTGC TCATTTTAAT GCCGCCGATA TCATCATCTT TATCAGCACC AATGCCGTTG AGTTCTCTTC ACAAGTTATT GAGCTAAAAA AACACAAGAC AGCTCAATTT TATGCCGTAG GTGACGCCAC TTTCCAAGCT TTAAAGGCAT TAGGCATAGA CGCATTTGCA GCACCATCTG ATTGCCAGCA AACCGAAGGT TTATTGACCC TTGCCGATCT ACAAGAGCTT ACCGGTCAAA ATATCATGAT TGTCAGAGGA GTTGGTGGGC GAGAAACATT GGCTGAGAAA CTGACCCAAC GTGGAGCAAA GGTTAATTAC TGGGAAACAT ACCAAAGAGC TTGCCCAGCC ATTAATGAAC GTACTCCCTA TCTATGGCAC GATGAAAAAG TTGATACGAT TATCATCACC AGTGGAGAAA TTCTCCATAG CCTAATCAAA CTTGTACCAA AAGAGTTATT TGCTTGGCTG CGTGCATGTC ATATTATAGT CCCTAGCTCC CGAGTTAAGG AGCAAGCTTT AGCTTATGGA CTCGAACACG TTACCAACGC CAAAGCTGCA AATAGTAAGG CCATGCTTTC CGCCCTAGGC TTATCCATTT AG
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Protein sequence | MKLLLTRPKG RNQSMSEALT QLGVPYIITP LLEVQASKTH QDQDAIAHFN AADIIIFIST NAVEFSSQVI ELKKHKTAQF YAVGDATFQA LKALGIDAFA APSDCQQTEG LLTLADLQEL TGQNIMIVRG VGGRETLAEK LTQRGAKVNY WETYQRACPA INERTPYLWH DEKVDTIIIT SGEILHSLIK LVPKELFAWL RACHIIVPSS RVKEQALAYG LEHVTNAKAA NSKAMLSALG LSI
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