Gene Swoo_0482 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0482 
Symbol 
ID6114716 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp669164 
End bp669895 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content44% 
IMG OID641631970 
Producturoporphyrinogen III synthase HEM4 
Protein accessionYP_001758875 
Protein GI170724849 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1587] Uroporphyrinogen-III synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTAT TACTGACGCG GCCAAAAGGC CGCAATCAGT CGATGTCAGA GGCCCTAACT 
CAACTTGGGG TCCCTTACAT CATTACGCCT TTACTGGAAG TTCAGGCAAG TAAAACTCAC
CAAGACCAAG ATGCTATTGC TCATTTTAAT GCCGCCGATA TCATCATCTT TATCAGCACC
AATGCCGTTG AGTTCTCTTC ACAAGTTATT GAGCTAAAAA AACACAAGAC AGCTCAATTT
TATGCCGTAG GTGACGCCAC TTTCCAAGCT TTAAAGGCAT TAGGCATAGA CGCATTTGCA
GCACCATCTG ATTGCCAGCA AACCGAAGGT TTATTGACCC TTGCCGATCT ACAAGAGCTT
ACCGGTCAAA ATATCATGAT TGTCAGAGGA GTTGGTGGGC GAGAAACATT GGCTGAGAAA
CTGACCCAAC GTGGAGCAAA GGTTAATTAC TGGGAAACAT ACCAAAGAGC TTGCCCAGCC
ATTAATGAAC GTACTCCCTA TCTATGGCAC GATGAAAAAG TTGATACGAT TATCATCACC
AGTGGAGAAA TTCTCCATAG CCTAATCAAA CTTGTACCAA AAGAGTTATT TGCTTGGCTG
CGTGCATGTC ATATTATAGT CCCTAGCTCC CGAGTTAAGG AGCAAGCTTT AGCTTATGGA
CTCGAACACG TTACCAACGC CAAAGCTGCA AATAGTAAGG CCATGCTTTC CGCCCTAGGC
TTATCCATTT AG
 
Protein sequence
MKLLLTRPKG RNQSMSEALT QLGVPYIITP LLEVQASKTH QDQDAIAHFN AADIIIFIST 
NAVEFSSQVI ELKKHKTAQF YAVGDATFQA LKALGIDAFA APSDCQQTEG LLTLADLQEL
TGQNIMIVRG VGGRETLAEK LTQRGAKVNY WETYQRACPA INERTPYLWH DEKVDTIIIT
SGEILHSLIK LVPKELFAWL RACHIIVPSS RVKEQALAYG LEHVTNAKAA NSKAMLSALG
LSI