Gene Swoo_0459 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0459 
Symbol 
ID6114689 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp570610 
End bp571659 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content48% 
IMG OID641631943 
Producthypothetical protein 
Protein accessionYP_001758852 
Protein GI170724826 
COG category[S] Function unknown 
COG ID[COG2013] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00266] conserved hypothetical protein TIGR00266 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCAAA CCTATAATAT TACCCTGACC GGCGAGCTGA TTGGTGAGAT AGAGCGCTCT 
GATGCTATCG CGGTTTTTGC CAAGTTATTT AAGTTGCCTC TAGACAAAGC TCATGACTTT
TTTCACAAAG CACCATTAGT GGTGAAAAAG TCAGTGGACG GCGATACCGC CAATAAGATC
CAGCAGATCC TTGAGAAGTC AGGGCTGCAT TGTGAAATCA ATCCGGTAGA GGTGGTTGAG
ACAGAGCAGA GCACTCAAGT GGGCGTGATG AATGAGTCCG CTGTAGAGGC TCAGGATGAG
CAAAGCGCTC AAGAGAGGGA AGAGATGTTA GATAGCGAAT CGCAAACCAC TACCGATCCA
GAGCAGCCCA GCGCAAGCTT TAAAGGGCTT AAGTTTGAGA TGGCAGGACA GCCTGATTAT
GGATTTGTAA CGGTACATGT GCCTGCTGGT GAGATGCTAA AAGTGGAAGC TTCAGCCATG
GCAACCATGG ACACTAACAT GCAGATGAAA ACTAAGATGC GTGGTGGACT AGGTAGAATG
GTCACTGGAG AGAATATCTT CGTTAATGAG TTTACCGCCG CGAATATGGA GGGAGAGGTG
GGTATTGCTC CTGGCGCGCC GGGGGATCTG TGTCACCAGT ATCTGGACAA TGAGACCATC
TATCTACAGA ATTCGGCATT TGTGGCTTGC AGCAGTGGGA TTGAAGTTGA GAGTAAATGG
CAAGGGTTAG TGAAGGGGTT TTTCTCTGGT GAGAGCCTGT TTTTAATTCG GGCACAGGGC
AAAGGCGATC TCTGGTTTAA CTCCTATGGC GCAATTATTG AAATTGATGT GAATGATGAC
TACGTGGTCG ATACTGGCAA TATTGTTGGC TTCACCGATG GCCTTGAGTA TCAGATCACT
AAAGTGGGCG GTTATAAGTC GTTCTTCTTC TCGGGAGAGG GGTTAGTGTG TCGCTTCTCT
GGTAAGGGAA AGGTCTGGAT CCAAACCCGA AGCTCGGCGG CATTTGTGGG CTGGGCACAC
TGGTTTAGAC CAGTGAAAAG CAAAGGTTAG
 
Protein sequence
MNQTYNITLT GELIGEIERS DAIAVFAKLF KLPLDKAHDF FHKAPLVVKK SVDGDTANKI 
QQILEKSGLH CEINPVEVVE TEQSTQVGVM NESAVEAQDE QSAQEREEML DSESQTTTDP
EQPSASFKGL KFEMAGQPDY GFVTVHVPAG EMLKVEASAM ATMDTNMQMK TKMRGGLGRM
VTGENIFVNE FTAANMEGEV GIAPGAPGDL CHQYLDNETI YLQNSAFVAC SSGIEVESKW
QGLVKGFFSG ESLFLIRAQG KGDLWFNSYG AIIEIDVNDD YVVDTGNIVG FTDGLEYQIT
KVGGYKSFFF SGEGLVCRFS GKGKVWIQTR SSAAFVGWAH WFRPVKSKG