Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_0458 |
Symbol | |
ID | 6114688 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 569915 |
End bp | 570598 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641631942 |
Product | hypothetical protein |
Protein accession | YP_001758851 |
Protein GI | 170724825 |
COG category | [S] Function unknown |
COG ID | [COG2013] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00266] conserved hypothetical protein TIGR00266 |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAATTG AATTGTTATA CCGTCCTGGT AATACGGCAG CCAAAGTCAC TCTTGAAGAG GGACAAACTA TCACGACTGA GTCCGGCGCT ATGATCGCCA TGAGCGGTAA TATGGACATT ACCACAACCA CCCATAAGAA GAAGTCTGGT GGATTTTTGA AAGCCGCTAA ACGTATGTTG GCTGGCGAGT CTCTGTTTTT GAACCATTTC GAGCCTAAAC AGGGTTCAGG TGAGCTGTTT CTGGGGAGCA GTCTTGCGGG CGATATGATG ACGATGGACT TAGATAATGA GAGTCTGATC GTGCAAAACA GCTCCTATAT GGCGTCATCA GAGGGGATAG ATGTCGATAT GGGCTGGCAG GGATTTAAGT CGCTTTTCTC CGGTGAAAGC GTGATCTGGT TGAACCTAAA AGGGCAGGGG AAGATCTTAA TCTCCTCCTT TGGCGCCATC TACCCTGTGG AAGTCGACGG TGAGTATATT GTCGATTCAG GCCATATTGT CGCGTTCGAT GAAACCTTAG ATTTCAGTAT TACTAAAGCT GGCAAAAGCT GGTGGCACTC CTACCTTGGT GGAGAGGGCT TAGTGTGTAA GTTCAAAGGC AAGGGGACAG TTTGGTGTCA ATCTCATAAT CCATCGAGTT TTGGTGGGGC GTTAAGCTCA TCACTTCGCG CTAGAAAAGC TTAA
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Protein sequence | MEIELLYRPG NTAAKVTLEE GQTITTESGA MIAMSGNMDI TTTTHKKKSG GFLKAAKRML AGESLFLNHF EPKQGSGELF LGSSLAGDMM TMDLDNESLI VQNSSYMASS EGIDVDMGWQ GFKSLFSGES VIWLNLKGQG KILISSFGAI YPVEVDGEYI VDSGHIVAFD ETLDFSITKA GKSWWHSYLG GEGLVCKFKG KGTVWCQSHN PSSFGGALSS SLRARKA
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