Gene Swoo_0458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0458 
Symbol 
ID6114688 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp569915 
End bp570598 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content47% 
IMG OID641631942 
Producthypothetical protein 
Protein accessionYP_001758851 
Protein GI170724825 
COG category[S] Function unknown 
COG ID[COG2013] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00266] conserved hypothetical protein TIGR00266 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAATTG AATTGTTATA CCGTCCTGGT AATACGGCAG CCAAAGTCAC TCTTGAAGAG 
GGACAAACTA TCACGACTGA GTCCGGCGCT ATGATCGCCA TGAGCGGTAA TATGGACATT
ACCACAACCA CCCATAAGAA GAAGTCTGGT GGATTTTTGA AAGCCGCTAA ACGTATGTTG
GCTGGCGAGT CTCTGTTTTT GAACCATTTC GAGCCTAAAC AGGGTTCAGG TGAGCTGTTT
CTGGGGAGCA GTCTTGCGGG CGATATGATG ACGATGGACT TAGATAATGA GAGTCTGATC
GTGCAAAACA GCTCCTATAT GGCGTCATCA GAGGGGATAG ATGTCGATAT GGGCTGGCAG
GGATTTAAGT CGCTTTTCTC CGGTGAAAGC GTGATCTGGT TGAACCTAAA AGGGCAGGGG
AAGATCTTAA TCTCCTCCTT TGGCGCCATC TACCCTGTGG AAGTCGACGG TGAGTATATT
GTCGATTCAG GCCATATTGT CGCGTTCGAT GAAACCTTAG ATTTCAGTAT TACTAAAGCT
GGCAAAAGCT GGTGGCACTC CTACCTTGGT GGAGAGGGCT TAGTGTGTAA GTTCAAAGGC
AAGGGGACAG TTTGGTGTCA ATCTCATAAT CCATCGAGTT TTGGTGGGGC GTTAAGCTCA
TCACTTCGCG CTAGAAAAGC TTAA
 
Protein sequence
MEIELLYRPG NTAAKVTLEE GQTITTESGA MIAMSGNMDI TTTTHKKKSG GFLKAAKRML 
AGESLFLNHF EPKQGSGELF LGSSLAGDMM TMDLDNESLI VQNSSYMASS EGIDVDMGWQ
GFKSLFSGES VIWLNLKGQG KILISSFGAI YPVEVDGEYI VDSGHIVAFD ETLDFSITKA
GKSWWHSYLG GEGLVCKFKG KGTVWCQSHN PSSFGGALSS SLRARKA