| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0442 |
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| Symbol | |
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| ID | 6114672 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 543383 |
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| End bp | 545071 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641631926 |
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| Product | acetolactate synthase 2 catalytic subunit |
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| Protein accession | YP_001758835 |
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| Protein GI | 170724809 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | [TIGR00118] acetolactate synthase, large subunit, biosynthetic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.596547 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACAAG GGCAGAATAA ACAGGGTCAG ATGATGCGCG GTGCCGATGC CGTGATCAAA
GTATTAACCG CTCATGGTGT GACCAATATC TTCGGTTACC CAGGCGGGGC AATTATGCCG
ATCTATGATG CACTCTATGG TGCCCCCGTT GAACATCTGC TCAGCCGCCA TGAGCAAGGC
GCCGCTTTTG CAGCTCTAGG CTATGCCAGA GCCAGTGGTA AAACGGGAGT TTGCTTTGCC
ACTTCAGGCC CTGGAGCCAC CAATTTAGTT ACCTCTCTAG CCGATGCACT ACTCGATTCC
GTCCCCGTTG TTGCTATCAC AGGCCAAGTC TCCACTGCGG TTATCGGCAC CGACGCTTTT
CAAGAGATCG ATGTCTTAGG TATGTCACTG TCTTGTACTA AGCACAGCTT TATGGTCACC
GAGATGGACG AGCTAGTACC AACGCTTTAC AAGGCGTTTG AGATAGCAGC TTCTGGTCGC
CCAGGCCCTG TATTGGTCGA TATCCCTAAA GATATCCAGA TAGGTATGCT GGAATATAAG
ACACCGCTTC AAGACCGTGT TGAGGAGCCC GAGCTAGATA CCGCTAAGCT AGATGATGCT
GTCACCCTGC TGACTCAAGC TAAGAAGCCG ATGCTCTATG TCGGTGGTGG TGTCGGCATG
GCAAGTGCCG TAGAACCATT GCGAAAATTC ATAAGAGTCA CAGGTGTCCC CTCCGTTGCA
ACATTAAAGG GATTAGGCTC CATTGCCCAT GACACTCCTG GCTATCTAGG GATGTTGGGA
ATGCACGGTT CAAAGGCGGC GAATATTGCT GTACAGGAGT GTGATCTCCT GATCGTGGTC
GGTGCAAGGT TTGATGACCG AGTGACTGGA CGCTTAGCTA CCTTTGCAGA GCATGCCAAG
GTGATCCATC TTGATATCGA TGCTGCAGAG CTGGGAAAAC TTCGATTACC TGAGGTGGCC
ATCGATGGCG ATCTGCGCCA GATCCTGCCA GCTCTTGCCA CTCCCCTTGA TATAACACCA
TGGCAAGAGG AGATCGCCAG TTTAAAAGTG GAACATCAAT GGAACTACGA CAGACCTGGT
GAGCTTATCT TTGCCCCTGC CATGTTGAAT CGTTTGGCAG ATAAACTTCC CGATGACAGT
GTTGTCTGTT GTGACGTGGG TCAGCACCAG ATGTGGGTAG CGCAGCATAT GTGGTTTCGC
AAACCTGAAG ATCATCTGTC GAGCGCTGGT TTAGGCACCA TGGGTTTTGG TTTACCTGCG
GCCATTGGCG CTAAAGTCTC TCGTCCCGAT GCTACTGTTG TCGCTGTGTC TGGTGATGGT
TCCTTTATGA TGAATGTACA GGAGCTGACC ACCATCAAGC GTCGCAAGCT GGCGGTTAAA
ATCTTGCTTA TCGATAATCA AAAGCTTGGC ATGGTGAAGC AGTGGCAGCA GCTGTTTTTT
GAGGAGAGAT ACAGCGAGAC CGATCTTTCC GATAATCCAG ATTTTGTCAC TATGGCATCG
GCATTCGATA TTCCCGGACG AACCATCACC ACAAGTGATG AAGTGGAAGC GGCACTGGAG
CATTTAGTCA ATTGCGATGG ACCTTATCTG CTACATGTGC GGATTGATGA CGCCCATAAC
GTCTGGCCAC TCGTACCGCC AGGGGCGTGT AACAGAGATA TGATGGAAGA GATGGATAAG
TCGACATAA
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| Protein sequence | MEQGQNKQGQ MMRGADAVIK VLTAHGVTNI FGYPGGAIMP IYDALYGAPV EHLLSRHEQG
AAFAALGYAR ASGKTGVCFA TSGPGATNLV TSLADALLDS VPVVAITGQV STAVIGTDAF
QEIDVLGMSL SCTKHSFMVT EMDELVPTLY KAFEIAASGR PGPVLVDIPK DIQIGMLEYK
TPLQDRVEEP ELDTAKLDDA VTLLTQAKKP MLYVGGGVGM ASAVEPLRKF IRVTGVPSVA
TLKGLGSIAH DTPGYLGMLG MHGSKAANIA VQECDLLIVV GARFDDRVTG RLATFAEHAK
VIHLDIDAAE LGKLRLPEVA IDGDLRQILP ALATPLDITP WQEEIASLKV EHQWNYDRPG
ELIFAPAMLN RLADKLPDDS VVCCDVGQHQ MWVAQHMWFR KPEDHLSSAG LGTMGFGLPA
AIGAKVSRPD ATVVAVSGDG SFMMNVQELT TIKRRKLAVK ILLIDNQKLG MVKQWQQLFF
EERYSETDLS DNPDFVTMAS AFDIPGRTIT TSDEVEAALE HLVNCDGPYL LHVRIDDAHN
VWPLVPPGAC NRDMMEEMDK ST
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