| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0421 |
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| Symbol | |
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| ID | 6114651 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 520287 |
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| End bp | 521339 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 641631905 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001758814 |
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| Protein GI | 170724788 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGAGA CATATTTGAT ACGAAGCGCT GCGTTACAGG GGTTTAGCGA CTTAGTGAAA
TCCTATGATG GTGAGCCAGC TGAACTGCTT GAAGCGGTGG GGCTCTCCTT TGAGGAGTTA
AATAGTAAAG AAACTCTTAT CTCTTTTCTC GCAGTGCAGC AGCTACTGGA GTTAAGCGCG
AATAAACTCA ATGTTCCAGG TTTTGGTTTA GCTTTATCTC AAGGCCAGAA TATAGATATG
TTGGGTCAAT TAGGCCTACT GATGGCAAGC TGTAAAACCC TTAAAGATGT CATGTTATCG
GTGCAAAGGT ACATGTCACT ACATTCGCCA GCGGAGAATT GGGTATTCAG TGAGGTTAAT
AATCTTGTTT ATATCACTCG GTTTGAGTAT GAGGCCAATA CTGTGCCGCT TAAACAGATA
AAAGAGTTGT CATTGGGGGT ATGTTTTAAA TTTTTGCAGC TTTTCATTGG ACTGAGTTTC
ACAGCCACAA GGGTTGAGTT ATCTCACAGT CCCGTGTCTG AGCTGAAGGC TTACCGTAAG
ATATTTAAAG TTGATGTGCA GTTTAACCAA GAGTATGACC AGATAATATT TGATAAGAAA
TATTTACAAC AAGTTGTGCA TCTTGATGAT CAAAATCGAA ATGAGTTTTT AGAGAAGTAC
ATTGATAACG CTGTATCTGC GACAGATTAT AATAATCTTG AGCGTCAAAT TATGGGGCTG
TTGATCCAAT ATATTGGTTC AGAAAATGCT TCTCTAGACA ATATCTCCCG TAAACTCGGT
ATGAATAAAA GGACCTTGCA GAGACAGCTT AAAACTCAAC AGATTAATTT TAAAGGGATA
TTAGCAAACA TACGTGGGCG TAAGGCGTGT TGGTATCTTA GTGCAAGTGA AATGAGCATT
ACTTTAATCA GTGAAGCGCT AGGATATAAA GACGTTAGTG CCTTTTCTCG TGCATTTAAA
TTGCTTTACG GTACTTCGCC ATCGCAATGG CGTAAAGCCA GAGGAGAGTT TGACTGCGAA
GGAGACTGTG TGGCTACAGG GGTTGGCGAA TGA
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| Protein sequence | MNETYLIRSA ALQGFSDLVK SYDGEPAELL EAVGLSFEEL NSKETLISFL AVQQLLELSA
NKLNVPGFGL ALSQGQNIDM LGQLGLLMAS CKTLKDVMLS VQRYMSLHSP AENWVFSEVN
NLVYITRFEY EANTVPLKQI KELSLGVCFK FLQLFIGLSF TATRVELSHS PVSELKAYRK
IFKVDVQFNQ EYDQIIFDKK YLQQVVHLDD QNRNEFLEKY IDNAVSATDY NNLERQIMGL
LIQYIGSENA SLDNISRKLG MNKRTLQRQL KTQQINFKGI LANIRGRKAC WYLSASEMSI
TLISEALGYK DVSAFSRAFK LLYGTSPSQW RKARGEFDCE GDCVATGVGE
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