Gene Swoo_0417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0417 
Symbol 
ID6114647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp514392 
End bp515360 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content49% 
IMG OID641631901 
ProductBAX protein 
Protein accessionYP_001758810 
Protein GI170724784 
COG category[R] General function prediction only 
COG ID[COG2992] Uncharacterized FlgJ-related protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACCTA TTCGTACCCT AAAAGCTATG TTGTTCATTG GCGTAGTGGC TGCCACAGAG 
GTAATGGCAG CGAGTTCTGG CCATACTTTT GAAACTGAAT TTGGAGCTCC TCTGATGCCG
GAGAGGATTG GACAGCCTTA TGCTGACGTT AAGGAGGAGA GTACTCTCTC GGGAGCGGCC
CAGCTGAGTA AGATGTTTGC GCAATCAGGT TATAACCTTG AGACAGTTAG GCAAGACAAT
AGGGCTCCTG AGCTGTATGT GATAAATCTT CCAGATGATC TTAACCAGCA GCCTGTTGAG
AGTAAGATTA ACGATTTTGT GCGCTTGTTG TTGCCTAACG TCTTAGCGGT CAATCAGCAG
ATCTTCAAAG TCAGGCAAAG CCTTATGTCG ATGGCTAAAC GGCCTACTGA GAGTTTGACT
GCGAAGGAGA CAGTGTGGCT ACAGGGGTTG GCGAATGACT ACGGCCTTAA AGAGCGTGAT
GTGAAAAGTG GCAAGAGCAA GGCGGTAGAT ATTAAGCTGC TTCTGCAACA TATCGATGTG
ATCCCGACGG GCATGGTGTT GGCTCAAGGG ATAGATGAAA GCGGCTGGGG CACCAGTCAC
TTTGCAATAC AGGGGAACGC GCTTTATGGG GAGCATCTAC CTCAAAGTGG CGGCAAATAC
CTGACCACAC CAGGTGGTCA TGTCAAAGTT GCCGCCTTCG ACAGCTTGTA CCAGGGGACC
GCTGCTTATA TTTATAATCT TAACTCTAGC CGCGCCTACC ACGGGCTGTG GCAGTTACGT
CAGCAGCTGC GCTTGCAGGG AAAGCCCGTT ACAGGATATG AGTTAGTTGG GGCTTTAGTG
GATTACTCGG TACGTGGTCA AGCCTATGTG GATAACCTAC GCAGTCTAAT CGAACATCAT
CAGCTGGATA GTTATGATAA CGTTGAGCTA ACACCTGAGC TTGGGCGTAA ACGTATTAAG
TTTAATTAA
 
Protein sequence
MTPIRTLKAM LFIGVVAATE VMAASSGHTF ETEFGAPLMP ERIGQPYADV KEESTLSGAA 
QLSKMFAQSG YNLETVRQDN RAPELYVINL PDDLNQQPVE SKINDFVRLL LPNVLAVNQQ
IFKVRQSLMS MAKRPTESLT AKETVWLQGL ANDYGLKERD VKSGKSKAVD IKLLLQHIDV
IPTGMVLAQG IDESGWGTSH FAIQGNALYG EHLPQSGGKY LTTPGGHVKV AAFDSLYQGT
AAYIYNLNSS RAYHGLWQLR QQLRLQGKPV TGYELVGALV DYSVRGQAYV DNLRSLIEHH
QLDSYDNVEL TPELGRKRIK FN