Gene Swoo_0409 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0409 
Symbol 
ID6114639 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp504077 
End bp504982 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content43% 
IMG OID641631894 
Productputative acyltransferase 
Protein accessionYP_001758803 
Protein GI170724777 
COG category[I] Lipid transport and metabolism 
COG ID[COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase 
TIGRFAM ID[TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGTGGAA TTTTGTCTTT AATCAGGGGC TCTTTGGCTT TTGTCTGTTG GGTCGTCAAT 
ACGCTGTTTT GGGTACTCCC CATCGTCCTC TTAAGCCCGA TTAAATTAAT TCCCATTCCG
GCACTTAGAA CTGCAATATC CTCTCTGCTT GATAACTGTG CAACCGCTTG GATCTCGATC
AATGGTGTCA TTGAACGTAT TTTTCACCCG GTAAAAATTG ACCTACACAG TAATGCAGAG
TTAACTCCAA AAGAGTGGTA TATGGTCATT GCCAACCACC AATCTTGGGT CGATATTTTA
ATCTTACAGC GAGTGCTTAA CCGTAAAATT CCTTTTTTAA AGTTCTTTCT TAAAAAGGAG
CTTATCTTTG TGCCCTTTTT AGGGCTAGCT TGGTGGGCAT TAGACTTCCC ATTTATGCGC
CGTTATAGCA CGGCTCAACT CAGGAGGAAC CCTAAACTTA AGGGTAAAGA TATTGAGATC
ACGCGTAGAG CGTGCGCCAA ATTTAAAAGC AAACCTGTAA GCGTGATGAA TTTTGTTGAG
GGAACCCGGT TTAAAGCGGA GAAACATCAA CAGCAAAACT CTCAATTTAA ACACCTACTA
AAACCCAAAG CCGGTGGTCT TGCCTTTGCG TTGTCAGCAA TGGGCGAGCA TATAAATAAA
CTGGTAAACG TCTCTATCTA TTATCCAGAG AAGGTACCAA GTTACTGGGA GTATATTAGC
GGCCAAGTAA AAGAGGTTCG CGTGCATATT ACAGTCACCG AGATCCCTGA TGAGATGCGT
GGGGATTATA TGAAAGATCG AGATTTTAAG ATCGCATTCC AAGAGCAGCT GAACCTAATT
TGGCAAGAGA AAGACCAGAT GCTGGATCTA TTAGCGCAAG ACAACCAAGT GAAACAGAAG
GTGTAA
 
Protein sequence
MGGILSLIRG SLAFVCWVVN TLFWVLPIVL LSPIKLIPIP ALRTAISSLL DNCATAWISI 
NGVIERIFHP VKIDLHSNAE LTPKEWYMVI ANHQSWVDIL ILQRVLNRKI PFLKFFLKKE
LIFVPFLGLA WWALDFPFMR RYSTAQLRRN PKLKGKDIEI TRRACAKFKS KPVSVMNFVE
GTRFKAEKHQ QQNSQFKHLL KPKAGGLAFA LSAMGEHINK LVNVSIYYPE KVPSYWEYIS
GQVKEVRVHI TVTEIPDEMR GDYMKDRDFK IAFQEQLNLI WQEKDQMLDL LAQDNQVKQK
V