Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_0382 |
Symbol | |
ID | 6114612 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 478899 |
End bp | 481190 |
Gene Length | 2292 bp |
Protein Length | 763 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641631867 |
Product | hypothetical protein |
Protein accession | YP_001758776 |
Protein GI | 170724750 |
COG category | [C] Energy production and conversion |
COG ID | [COG1032] Fe-S oxidoreductase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAAGTTG AATCTACGTT ATTTACGTAT CCTAAGTATC GCGCTGAAAT GAAGCGACCA GCCCCATTTT TACCTATGTC TCGTAAAGAG ATGGACAGGT TAGGTTGGGA TAGTTGCGAC ATCATCATAG TGACCGGTGA CGCTTATGTA GATCATCCTA GTTTTGGCAT GGCAGTTATT GGTCGTATGC TTGAATCACA GGGCTTTAGA GTGGGGATAA TCTCTCAGCC TGACTGGTCA AATAAAAATG ACTTTATGAA GCTGGGTAAG CCAAATCTCT ATTTTGGTGT GACCGCGGGA AATATGGACT CGATGATCAA TCGCTATACT GCCGAGCGCC GTATGCGTCA TGACGATGCC TACACTGCGG GTAATATTGG CGGAAAACGT CCCGATCGCG CCGTCACTGT GTATACCCAA AGATGTAAAG AAGCCTATAA ACAGGTGCCT GTAGTTATAG GTGGTATCGA AGCTAGCCTA CGCCGTATTG CACACTACGA TTACTGGTCC GATAAAATTC GCCGCAGTGT TATTCTAGAT GCTAAGGCTG ATATCTTAGT TTATGGCAAT GCCGAGCGTC CGTTGGTGGA GCTATCACAT CGCCTCGCCG ATGGTGAGCC TATCTCTGAG CTGCATAATA TTCGCGGCAC CACAGTGATC CGTAAAGAGC CCCTTTCTGG TTGGAAAGGG ATGGACTCGC GTAAAATCGA TCAACTTCAT AAGATAGATC CCATTCCTCA CCCCTATGGC GCCGATGATG TAGGTTGTAA AAACCTCTCA GGCCCATCGG ATGTGAAGAT ATTTGATAAC GATGCGCCTA AAGCTATCAG TGTTCAACCT GCTAGGCCTA AGCCTTGGGA GAAGACCTAT GTCTTGCTGC CGAGTTTTGA GAAGGTATCA GGTGATAAGT ATCTCTACGC TCACGCATCG CGGATTTTGC ATCAGGAGCA GAATCCTGGT TGTGCTCGAG CTCTATTTCA AAAGCATGCC GAACGCGCTA TTTGGGTAAA TCCACCTGCT TGGCCGCTCA ATACCGACGA GATGGATGGT GTATTTGGCT TAGCCTATGC GCGTGTGCCT CACCCTTCAT ACGGTAAAGA GGTTATTCCT GCTTACGACA TGATTAAGAC CTCAATTAAT ATCATGCGTG GTTGTTTCGG TGGTTGCTCA TTCTGCTCCA TTACCGAGCA CGAGGGGCGG ATCATTCAAA GTCGTTCACA AGAGTCGATT GTGAACGAGA TTAAAGATAT TCAAGATAAA GTGCCTGGTT TTACTGGTGT GATCTCTGAT CTCGGAGGCC CGACAGCCAA CATGTACCAT TTAGGCTGTA AGAGTGAGAA GGCGGAGAAA ACTTGTCGTC GCATCTCCTG TATCTTCCCA GATATCTGTG GCCATATGGA TACGGATCAT CAACCGACTA TCGATCTCTA TCGCGCCGCA CGTGATGTGC CAGGCATTAA GAAGATCTTA ATCGCCTCGG GTGTGCGTTA TGACTTAGCA TCTGAAGATC CCCGCTATGT GAAGGAGCTT GCGACTCACC ATGTTGGTGG CTACCTTAAA ATCGCCCCAG AGCATACCGA AGAGGGCCCG CTGAATAAGA TGATGAAGCC GGGCATGGGA ACCTACGACA AGTTTAAAGA GCTTTTTGAT AAATATTCGA AAGAAGCGGG TAAGAAGCAG TACCTGATCC CCTACTTTAT CTCGGCGCAT CCAGGAACGA CTAACGAAGA TATGGTCAAT CTGGCTTTGT GGCTGAAGGG GGAGAAGTTC AAATTAGATC AGGTGCAAAA CTTCTATCCA TCGCCCATGG CAAATGCGAC AACCATTTAC CACACTGAGC TGAACTCTCT TAAAAATGTG AAGCACACCA GTGAACAAGT GACTGTGCCT AAAAAGGGGC GTCAACGTAA GTTACACAAG GCGTTGCTGC GTTATCACGA TGAAGCTGGC TGGCCTATGA TCCGTGAAGC CCTGATTGAG ATGGGCAAAG AGAAGTTAAT TGGCAGTGGT GCAAACTGTT TGGTCCCTGC TGAGTCGCGT CAGGAGCGTG AAGCTAGACG TAATAAGGGT AAAGGCGGCA ACAAGAGCAG CAAGAGTAAT GGTGGTCAAA AGGCATTAAC TCGCTTCTCT GAAGATCAAT TTAGCGATCG TAAACCTAAA GGTGGAAAGT CAGGTAGTGC CGGTAAACAG GGCTCAGGTA AGGGCGGTAA CGGGCAGGCT AAGAACTCCG CTGGCTCTAA GCGACCGCCG AAGAAAAATG CTTGGGGCAC TACACCTAAA CATCAGCGAT GA
|
Protein sequence | MQVESTLFTY PKYRAEMKRP APFLPMSRKE MDRLGWDSCD IIIVTGDAYV DHPSFGMAVI GRMLESQGFR VGIISQPDWS NKNDFMKLGK PNLYFGVTAG NMDSMINRYT AERRMRHDDA YTAGNIGGKR PDRAVTVYTQ RCKEAYKQVP VVIGGIEASL RRIAHYDYWS DKIRRSVILD AKADILVYGN AERPLVELSH RLADGEPISE LHNIRGTTVI RKEPLSGWKG MDSRKIDQLH KIDPIPHPYG ADDVGCKNLS GPSDVKIFDN DAPKAISVQP ARPKPWEKTY VLLPSFEKVS GDKYLYAHAS RILHQEQNPG CARALFQKHA ERAIWVNPPA WPLNTDEMDG VFGLAYARVP HPSYGKEVIP AYDMIKTSIN IMRGCFGGCS FCSITEHEGR IIQSRSQESI VNEIKDIQDK VPGFTGVISD LGGPTANMYH LGCKSEKAEK TCRRISCIFP DICGHMDTDH QPTIDLYRAA RDVPGIKKIL IASGVRYDLA SEDPRYVKEL ATHHVGGYLK IAPEHTEEGP LNKMMKPGMG TYDKFKELFD KYSKEAGKKQ YLIPYFISAH PGTTNEDMVN LALWLKGEKF KLDQVQNFYP SPMANATTIY HTELNSLKNV KHTSEQVTVP KKGRQRKLHK ALLRYHDEAG WPMIREALIE MGKEKLIGSG ANCLVPAESR QEREARRNKG KGGNKSSKSN GGQKALTRFS EDQFSDRKPK GGKSGSAGKQ GSGKGGNGQA KNSAGSKRPP KKNAWGTTPK HQR
|
| |