Gene Swoo_0376 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0376 
Symbol 
ID6114606 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp472574 
End bp473443 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content46% 
IMG OID641631861 
ProductS-formylglutathione hydrolase 
Protein accessionYP_001758770 
Protein GI170724744 
COG category[R] General function prediction only 
COG ID[COG0627] Predicted esterase 
TIGRFAM ID[TIGR02821] S-formylglutathione hydrolase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGCAA ACTCAGTAGG AGACCCAAGC GTGACAATTG AAAATGTGAG TGTGAATAAG 
AGCTTTGATG GCTGGCATAA GCAGTATAGC CACAGATCCA GTGTCTTAAA TTGTGAGATG
CGATTCGCCA TCTACCTGCC ACCACAAGCA TCTAATGGTG AGAAAGTACC AGTACTCTAT
TGGTTATCTG GCTTAACCTG CACTGATGAA AACTTTATGC AGAAAGCTGG GGCACAGGCA
TTGGCAGCTG AGCTTGGTAT CGCTATTGTT GCACCGGATA CCAGCCCAAG AGGCGATGAT
GTAGCCGATG ATGAAGGATA CGATCTGGGC AAAGGGGCGG GGTTCTATGT TAATGCGACT
CAGGTACCTT GGAGCCGCCA TTATCAGATG TATGACTATG TCGTTGATGA GCTGCCAAAG
CTGATTGAAT CTATGTTCCC AGTTAGTGAT AAGCGCTCGA TCGCAGGACA CTCTATGGGT
GGACATGGCG CTTTAGTTAT TGCACTGAGA AACAGTGACA CCTATCAGTC TGTGTCGGCG
TTTAGTCCTA TTAGTAATCC GATCAATTGT CCTTGGGGCA AGAAGGCATT TACGGCTTAT
TTAGGTCGAG ATACCAAAAC TTGGTCTGAT TATGATGCTA GTGTACTTAT GCGTCAGGCG
ACAAGCTTTG TTCCAGCTTT AGTGGACCAA GGTGATGGTG ATAACTTTAT GGTTGAGCAG
TTAAAGCCTG AAATGCTTGA AGCTGCAGCG AGCGTGAGCG GTTACCCTTT AACCTTGAAC
ATCCGTGAAG GCTATGATCA CAGTTACTAC TTTATCTCTA GCTATATCGA GAACCACCTG
CGTTTTCATG CTGAGCACTT AAAGAAGTAA
 
Protein sequence
MIANSVGDPS VTIENVSVNK SFDGWHKQYS HRSSVLNCEM RFAIYLPPQA SNGEKVPVLY 
WLSGLTCTDE NFMQKAGAQA LAAELGIAIV APDTSPRGDD VADDEGYDLG KGAGFYVNAT
QVPWSRHYQM YDYVVDELPK LIESMFPVSD KRSIAGHSMG GHGALVIALR NSDTYQSVSA
FSPISNPINC PWGKKAFTAY LGRDTKTWSD YDASVLMRQA TSFVPALVDQ GDGDNFMVEQ
LKPEMLEAAA SVSGYPLTLN IREGYDHSYY FISSYIENHL RFHAEHLKK