| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0372 |
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| Symbol | |
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| ID | 6114602 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 468772 |
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| End bp | 469650 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641631857 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001758766 |
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| Protein GI | 170724740 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAATT GGGAAGGCAT CAGTGAATTT GTTGCAGTTG CAGAGGCCGA GAGCTTTACT
AAGGCTTCAC AACGCTTGGG GATCTCCACC GCACAAGTTA GCAGGCAAGT CAGCGCATTA
GAAACCCGCT TAGCCACAAA ACTGTTTCAC CGCACAACCC GAAAAGTCTC CACCACAGAG
GTAGGAAGAG TCTATTACCA GCACTGCAGA CAGGTCTTAG ATGGGCTAGA TGAAGCTGAA
CGTGCCATCA CCAATTTGCA AAGCTCACCG CGGGGATTAC TCAAGATCAC AGCGCCAGTA
ACCTATGGAG AGATGACGAT TGCCCCACTG ATTAATGATT TTGCCGCCAA GTATCCAGAG
CTAGAAGTTA AGATAAACTT AACTAATCAG AAACTTGACC TGATCGACGA GGGCTATGAT
CTGGCCATCA GATTAGGCCA ACTTGAAGAC TCAAGCATGA TGGCCAAGCG ATTAAGCTCT
CGCACTCAGT ATGTTTGCGC CTCACCCAGC TACCTTTCAA CTTTTGGTAT CCCTCACTCC
CTTTCAGAAC TTGAGCAGCA CAACTGCTTA TTGGGAACCA TGGACTACTG GCGATTCGAA
GATAATGGCA AAACTAGAAA TGTCAGAGTA AAAGGGAATC TAAGCTGTAA CAGCGGTCAC
GCCTTAGTCG ACGCAGCAAT AAAGGGAATT GGAATAATTC AACTCCCTGA CTACTATTTA
CAATCCTTCA TTGAGGATGG GCAACTGGTA CCGCTGCTGG AGCAAAACCG CTCACCAGAG
GAGGGAATTT GGGCACTCTA CCCACATAAT CGGCATCTAT CGCCTAAGGT GCGTATGTTA
CTGGATCACT TAACTCAAGC TTTGGCATCC CACAAGTAA
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| Protein sequence | MFNWEGISEF VAVAEAESFT KASQRLGIST AQVSRQVSAL ETRLATKLFH RTTRKVSTTE
VGRVYYQHCR QVLDGLDEAE RAITNLQSSP RGLLKITAPV TYGEMTIAPL INDFAAKYPE
LEVKINLTNQ KLDLIDEGYD LAIRLGQLED SSMMAKRLSS RTQYVCASPS YLSTFGIPHS
LSELEQHNCL LGTMDYWRFE DNGKTRNVRV KGNLSCNSGH ALVDAAIKGI GIIQLPDYYL
QSFIEDGQLV PLLEQNRSPE EGIWALYPHN RHLSPKVRML LDHLTQALAS HK
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