Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_0348 |
Symbol | |
ID | 6114577 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 441911 |
End bp | 442918 |
Gene Length | 1008 bp |
Protein Length | 335 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641631835 |
Product | tryptophanyl-tRNA synthetase |
Protein accession | YP_001758744 |
Protein GI | 170724718 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0180] Tryptophanyl-tRNA synthetase |
TIGRFAM ID | [TIGR00233] tryptophanyl-tRNA synthetase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.140267 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTAACC CAGTAAAACC CATAGTACTT AGCGGTGCAC AGCCGTCAGG TGAGCTGACA ATAGGTAACT ACATGGGCGC ATTAAGGCAG TGGGTAGCCA TGCAAGACAG TCACGACTGT CTCTATTGTG TTGTCGATCT TCATGCGATC ACTGTAAGGC AAGATCCTAA ACTTCTCAGA GAAGCTTGTT TAGACACATT AGCACTTTAC TTAGCTTGTG GTGTAGACCC GAAAAAAAGC ACTGTCTTTA TTCAATCTCA GGTGCCTCAG CATACTCAAC TTGGTTGGGC GTTAAACTGT TATACCCAGA TGGGTGAACT GAATCGTATG ACTCAGTTCA AAGATAAGTC TCAAAAGCAT GCGAATAATA TCAATGTTGG CTTGTTTGGT TATCCGGTAC TTATGGCTGC AGATATTTTA CTATATCAAG CCAATGAGAT CCCTGTAGGC CAAGATCAAA AACAACATCT TGAGCTGACT CGTGATATCG CGACTCGCTT TAATAATGCT TATGGAGATA CATTTACTAT CCCTGAGCCA TTTATTCCTG AGCATGGGGC TAAGGTGATG TCACTGCAAG ATCCGCTTAA GAAGATGTCT AAGTCTGACG ATAACCGTAA TAATGTTATT GGTTTGCTGG AAGATCCTAA GAAGATCATG AAGAAGATTA AGAAGGCGAT GACAGATAGC GATGAGCCGC CAGTGGTTCG TTTCGATACT GAAAACAAGC CGGGTGTATC AAACCTATTA AGCTTGATGT CAGGTGTTTC TGGTAAGAGC ATTGCTGGTC TTGAGGCTGA GTTTGAAGGG AAGATGTATG GTCATCTTAA AGTGGCTGCC GGCGAAGCGG TTGTCGAGAT GATAGAGCCA CTGCAAGCTA GATATCGTGA GTTTAGAGAA GATCAGACTT TCCTAAATCA GGTGATGAGC GATGGCGCTG AGAAAGCCCA AACTCGTGCT GAAGTGACGG TTAAAAAGGT ATACGAGAAG ATCGGATTGC TGGTTTAA
|
Protein sequence | MTNPVKPIVL SGAQPSGELT IGNYMGALRQ WVAMQDSHDC LYCVVDLHAI TVRQDPKLLR EACLDTLALY LACGVDPKKS TVFIQSQVPQ HTQLGWALNC YTQMGELNRM TQFKDKSQKH ANNINVGLFG YPVLMAADIL LYQANEIPVG QDQKQHLELT RDIATRFNNA YGDTFTIPEP FIPEHGAKVM SLQDPLKKMS KSDDNRNNVI GLLEDPKKIM KKIKKAMTDS DEPPVVRFDT ENKPGVSNLL SLMSGVSGKS IAGLEAEFEG KMYGHLKVAA GEAVVEMIEP LQARYREFRE DQTFLNQVMS DGAEKAQTRA EVTVKKVYEK IGLLV
|
| |