Gene Swoo_0348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0348 
Symbol 
ID6114577 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp441911 
End bp442918 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content44% 
IMG OID641631835 
Producttryptophanyl-tRNA synthetase 
Protein accessionYP_001758744 
Protein GI170724718 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0180] Tryptophanyl-tRNA synthetase 
TIGRFAM ID[TIGR00233] tryptophanyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.140267 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAACC CAGTAAAACC CATAGTACTT AGCGGTGCAC AGCCGTCAGG TGAGCTGACA 
ATAGGTAACT ACATGGGCGC ATTAAGGCAG TGGGTAGCCA TGCAAGACAG TCACGACTGT
CTCTATTGTG TTGTCGATCT TCATGCGATC ACTGTAAGGC AAGATCCTAA ACTTCTCAGA
GAAGCTTGTT TAGACACATT AGCACTTTAC TTAGCTTGTG GTGTAGACCC GAAAAAAAGC
ACTGTCTTTA TTCAATCTCA GGTGCCTCAG CATACTCAAC TTGGTTGGGC GTTAAACTGT
TATACCCAGA TGGGTGAACT GAATCGTATG ACTCAGTTCA AAGATAAGTC TCAAAAGCAT
GCGAATAATA TCAATGTTGG CTTGTTTGGT TATCCGGTAC TTATGGCTGC AGATATTTTA
CTATATCAAG CCAATGAGAT CCCTGTAGGC CAAGATCAAA AACAACATCT TGAGCTGACT
CGTGATATCG CGACTCGCTT TAATAATGCT TATGGAGATA CATTTACTAT CCCTGAGCCA
TTTATTCCTG AGCATGGGGC TAAGGTGATG TCACTGCAAG ATCCGCTTAA GAAGATGTCT
AAGTCTGACG ATAACCGTAA TAATGTTATT GGTTTGCTGG AAGATCCTAA GAAGATCATG
AAGAAGATTA AGAAGGCGAT GACAGATAGC GATGAGCCGC CAGTGGTTCG TTTCGATACT
GAAAACAAGC CGGGTGTATC AAACCTATTA AGCTTGATGT CAGGTGTTTC TGGTAAGAGC
ATTGCTGGTC TTGAGGCTGA GTTTGAAGGG AAGATGTATG GTCATCTTAA AGTGGCTGCC
GGCGAAGCGG TTGTCGAGAT GATAGAGCCA CTGCAAGCTA GATATCGTGA GTTTAGAGAA
GATCAGACTT TCCTAAATCA GGTGATGAGC GATGGCGCTG AGAAAGCCCA AACTCGTGCT
GAAGTGACGG TTAAAAAGGT ATACGAGAAG ATCGGATTGC TGGTTTAA
 
Protein sequence
MTNPVKPIVL SGAQPSGELT IGNYMGALRQ WVAMQDSHDC LYCVVDLHAI TVRQDPKLLR 
EACLDTLALY LACGVDPKKS TVFIQSQVPQ HTQLGWALNC YTQMGELNRM TQFKDKSQKH
ANNINVGLFG YPVLMAADIL LYQANEIPVG QDQKQHLELT RDIATRFNNA YGDTFTIPEP
FIPEHGAKVM SLQDPLKKMS KSDDNRNNVI GLLEDPKKIM KKIKKAMTDS DEPPVVRFDT
ENKPGVSNLL SLMSGVSGKS IAGLEAEFEG KMYGHLKVAA GEAVVEMIEP LQARYREFRE
DQTFLNQVMS DGAEKAQTRA EVTVKKVYEK IGLLV