Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_0346 |
Symbol | |
ID | 6114575 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 440529 |
End bp | 441203 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641631833 |
Product | ribulose-phosphate 3-epimerase |
Protein accession | YP_001758742 |
Protein GI | 170724716 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0036] Pentose-5-phosphate-3-epimerase |
TIGRFAM ID | [TIGR01163] ribulose-phosphate 3-epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCCAT TTCTTATCGC CCCCTCTATT TTGTCTGCTG ATTTTGCCCG TTTGGGTGAG GATGTTGATG CCGTTCTTAA CGCAGGTGCC GATGTAGTTC ACTTTGATGT TATGGATAAC CATTATGTTC CTAACCTAAC CATAGGTCCT ATGGTGTGCC AAGCATTGCG AGATTACGGC GTGACAGCTG ATATTGATGT CCATCTTATG GTGAAGCCAG TCGATCGCAT TATTCCTGAC TTTGCAAAAG CAGGGGCTTC GATTATTACC TTTCATCCTG AAGCGAGTGA GCATTTAGAT CGCTCTCTAC AATTGATTAA AGAGTCAGGC TGTAAAGCGG GCCTGGTATT TAACCCTGCA ACACCACTGC ATTATTTAGA TCATGTGATG GATAAGCTCG ATGTCATCTT GTTGATGTCA GTAAACCCAG GTTTTGGAGG GCAATCTTTT ATTCCTTCAA CGTTAGATAA ACTGCGTCAG GTAAGAAAGC TTATCGATGA CAGTGGCTAC GATATTCGTC TTGAGGTCGA TGGCGGTGTT AAGGTCGATA ATATTGCTGA AATCGCTGCA GCAGGTGCAG ATATGTTTGT TGCTGGCTCG GCGATCTTTA ACAAACCTGA TTATAAAGCT GTGATCGATG AGATGCGTAG CGAACTTGCT AGTATAGAGT CTTAA
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Protein sequence | MRPFLIAPSI LSADFARLGE DVDAVLNAGA DVVHFDVMDN HYVPNLTIGP MVCQALRDYG VTADIDVHLM VKPVDRIIPD FAKAGASIIT FHPEASEHLD RSLQLIKESG CKAGLVFNPA TPLHYLDHVM DKLDVILLMS VNPGFGGQSF IPSTLDKLRQ VRKLIDDSGY DIRLEVDGGV KVDNIAEIAA AGADMFVAGS AIFNKPDYKA VIDEMRSELA SIES
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