Gene Swoo_0343 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0343 
Symbol 
ID6114572 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp438929 
End bp439768 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content42% 
IMG OID641631830 
ProductDNA adenine methylase 
Protein accessionYP_001758739 
Protein GI170724713 
COG category[L] Replication, recombination and repair 
COG ID[COG0338] Site-specific DNA methylase 
TIGRFAM ID[TIGR00571] DNA adenine methylase (dam) 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAAAA AACAGAGAGC CTTTCTTAAG TGGGCAGGTG GAAAATTTAA ACTGATTGAA 
GCTCTCACTG AGCACTTACC TGAAGGTCAA CGGCTCGTTG AACCATTTGT TGGAGCGGGA
TCGGTTTTTC TTAACACTGA TTATCCAAGT TACCTTTTGT GTGATATCAA CAAAGATCTC
ATCAATCTTT ATAAAATCAT TCAAAAAGAG CCTGAGAAAT ATATCGCTGC CGCGAAAGCC
ATGTTTGTTC CTGAAATGAA CGAAAAAGAA GCCTATTACC GTGTTCGTGC TGAGTTTAAC
CTCAGTACAG ACCCTTTCCT CCGCTCTGTT TATTTTCTTT ATATGAATCG CCATGGTTTT
AATGGCTTGT GCCGTTATAA CCGGAAGGGG GGCTTTAATG TTCCCTTTGG TTCCTATAAG
AAACCTTACT TTCCTGAGAA TGAGATCCGT GCTTTTTCTG AAAAAGCACA AAAAGCTGAA
TTCAAGTGTA TTGGTTATGA GGATGCGTTC GAGCTGACTA CAAGTGGTGA TGTTGTCTAC
TGCGATCCGC CTTATGCGCC GCTTTCAACA ACGGCAAGTT TTACGACTTA TGTAGGCACA
GGTTTTAGTT TGGATGACCA AGCGTTACTT GCCCGTAAAT CACGCCACAC TGCGATTGAT
AATGGTATAC CAGTGCTGAT AAGTAATCAT GATATCCCTC TTACCCGAGA GCTATATCAC
GGTGCTCGAT TTGATACTAT TCAGGTGCAG CGAAATATCA GTCAGAAGGG CAGTGCGCGT
AAGAAAGTCG ATGAGTTAAT GGCTCTTTAT GATGACCGTT ACCATAGTGA AAATGATTAA
 
Protein sequence
MSKKQRAFLK WAGGKFKLIE ALTEHLPEGQ RLVEPFVGAG SVFLNTDYPS YLLCDINKDL 
INLYKIIQKE PEKYIAAAKA MFVPEMNEKE AYYRVRAEFN LSTDPFLRSV YFLYMNRHGF
NGLCRYNRKG GFNVPFGSYK KPYFPENEIR AFSEKAQKAE FKCIGYEDAF ELTTSGDVVY
CDPPYAPLST TASFTTYVGT GFSLDDQALL ARKSRHTAID NGIPVLISNH DIPLTRELYH
GARFDTIQVQ RNISQKGSAR KKVDELMALY DDRYHSEND