Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_0324 |
Symbol | |
ID | 6114550 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 407396 |
End bp | 409450 |
Gene Length | 2055 bp |
Protein Length | 684 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641631808 |
Product | endothelin-converting protein 1 |
Protein accession | YP_001758720 |
Protein GI | 170724694 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3590] Predicted metalloendopeptidase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000623227 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00121593 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | ATGAAAAGAG TAAGCAAGCT GGCAATTGGC ATCGCCTTAA GTTTAGGTCT TGCTGCGTGC AGTAGTAATG AGCCAAGTGC ACCGGAAGTA CAATCAAAGA GCATGGTTTC TGGTGTCGAG AAGGCTAACT TCGATACCTC TGTACGCCAC CAAGATGATT TTTATTATAG TGTTAATGGT CACTGGCTAG CGAACACACC AATCCCCGAT GATAAGTCTA ACTATGGTGC CTTCTCTGTT CTCTATGAGC GGAGCCAAAA AGCGCTAAAA CAGATTATCG ATGATGCTGC ATCTAAGCCA AATAAACTAG ATGGCTCCAG TGAGCAAAAA GTGGGTGACT TCTATAACAG CTATATGAAT ACCGATATTG TAGAGCGGTT AGGTATTGCA CCACTAAGTG AGCAGCTTTC TGATATCTCT CTGGCGAAAG ATCATGATGA TATTGCCAGT TTAATGGGAG GCCTCTTGCT CAATGGTGTG CAGATCCCAT TTGGCTTTTA CGTTAATAAT GACGCAAAAA AATCTACTCA GTATGCCGTT TACCTTTATC AGTCAGGCCT AAGCCTGCCA GATCGTGACT ATTACTTAAA AGATGATGCA AAGTTTGTGG CTAATAGAGC CGCACTTAAT ACTTATGTCA CCGATATTAT GACTCAAGCA GGCAGTAAAG ATGCAAAGCG TATCGCTGCT AGTGTTGCGA AAATAGAGCA CTTTATTGCT AAGAGTCAAT GGAGCCGTGT GGAGTCTCGC GATGCTAATA AGAGTTATAA CAAAATGAAT AGAGCAGAAC TACAGGCAAG TATGCCTGAG TTTGATTTTG TTCAGTTTGC TGCGAGTGCA GATATTGGCA AAGTGAAAGA GGTTATTGTT CGTCAAAAAT CCTACTTTGA GGAGTTTGGC AGGCACTTCA CCGGATTCAC TGTTACTGAA TGGCAGGATT ACCTCTCTTT TCATCTTGTT GATAGTTATG CCGAGCTATT AAGTCAAAAC TTTGTTGATC TGCATTTTAA TTTTCACAGT AAAACCCTGA TGGGCATAGA AGCACAGAAG CCACGTTGGA AAAGAGCGGT TGATGCTGCA GACCAAGTGC TCGGTGAGCT AGTTGGTAAG GAGTATGTAA AGGAACACTT CAAGCCAGAA GCCAAAGAGA AGATGGAGTC ACTGATCCAA GATCTGATCA AAGGGTTTGA AGTGAGCATT AATGAACTTG AATGGATGAC GCCTGAAACA AAGGTCGCCG CTCAGGAAAA ACTCTCTAAG TTCACTTATA AGATAGGTTA CCCAGATAAA TGGAGAGATT ACACCGACCT CCAAATTAAA CCAGATGAGC TGGTGGGTAA TTATCAGCGT TACGCTAAGT TTGAATATAA CACCATGCTA GATAAGCTTG GTAAGCCTAT CGATCGCACT GAATGGCATA TGACGCCGCA AACCGTTAAT GCTTACTATA ATCCGGTAAT GAATGAAATT GTGTTTCCAG CCGCGATTTT ACAGCCTCCC TTCTTTAATC TTGAAGCGGA TGATGCAATC AACTTTGGTG GTATCGGTGC GGTGATTGGC CATGAGATAA GTCATGGTTT CGATGATCAA GGCGCTAAGT ATGATGGTGA TGGTAATTTA CGTAATTGGT GGACAGATGC CGATCGTGAG GAGTTTCAAA AACGTGGTGC TCAACTATCT GCTCAATACT CTAAATATGA AGCGCTACCA GGTAAACATG TAAATGGTGA TCTGACATTA GGTGAGAATA TCGGTGATCT TGGAGGCTTA ACGGTTGCAG CACGTTCATA TCACCTAAGC TTAGATGGTC AAGAAGCACC AGTTATTGAC GGATTAACTG GAGAGCAGAG GCTCTTTATT GGCTGGTCAC AAGTATGGCG TCGTAACTAT CGTGATGAAG AGCTAAGTCG TCGTTTAATG ACAGACTCTC ACTCACCTAG TCACTTCCGT GCGATGGGGA CGCCAAGAAA TATTCCTGCA TTTTATCAAG CCTTCGATTT AAAAGAGGGA GATAAGATGT TCTTAGCTCC AGAAGATCGA GTAAAGATCT GGTAG
|
Protein sequence | MKRVSKLAIG IALSLGLAAC SSNEPSAPEV QSKSMVSGVE KANFDTSVRH QDDFYYSVNG HWLANTPIPD DKSNYGAFSV LYERSQKALK QIIDDAASKP NKLDGSSEQK VGDFYNSYMN TDIVERLGIA PLSEQLSDIS LAKDHDDIAS LMGGLLLNGV QIPFGFYVNN DAKKSTQYAV YLYQSGLSLP DRDYYLKDDA KFVANRAALN TYVTDIMTQA GSKDAKRIAA SVAKIEHFIA KSQWSRVESR DANKSYNKMN RAELQASMPE FDFVQFAASA DIGKVKEVIV RQKSYFEEFG RHFTGFTVTE WQDYLSFHLV DSYAELLSQN FVDLHFNFHS KTLMGIEAQK PRWKRAVDAA DQVLGELVGK EYVKEHFKPE AKEKMESLIQ DLIKGFEVSI NELEWMTPET KVAAQEKLSK FTYKIGYPDK WRDYTDLQIK PDELVGNYQR YAKFEYNTML DKLGKPIDRT EWHMTPQTVN AYYNPVMNEI VFPAAILQPP FFNLEADDAI NFGGIGAVIG HEISHGFDDQ GAKYDGDGNL RNWWTDADRE EFQKRGAQLS AQYSKYEALP GKHVNGDLTL GENIGDLGGL TVAARSYHLS LDGQEAPVID GLTGEQRLFI GWSQVWRRNY RDEELSRRLM TDSHSPSHFR AMGTPRNIPA FYQAFDLKEG DKMFLAPEDR VKIW
|
| |