Gene Swoo_0324 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0324 
Symbol 
ID6114550 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp407396 
End bp409450 
Gene Length2055 bp 
Protein Length684 aa 
Translation table11 
GC content43% 
IMG OID641631808 
Productendothelin-converting protein 1 
Protein accessionYP_001758720 
Protein GI170724694 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3590] Predicted metalloendopeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000623227 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00121593 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAAAAGAG TAAGCAAGCT GGCAATTGGC ATCGCCTTAA GTTTAGGTCT TGCTGCGTGC 
AGTAGTAATG AGCCAAGTGC ACCGGAAGTA CAATCAAAGA GCATGGTTTC TGGTGTCGAG
AAGGCTAACT TCGATACCTC TGTACGCCAC CAAGATGATT TTTATTATAG TGTTAATGGT
CACTGGCTAG CGAACACACC AATCCCCGAT GATAAGTCTA ACTATGGTGC CTTCTCTGTT
CTCTATGAGC GGAGCCAAAA AGCGCTAAAA CAGATTATCG ATGATGCTGC ATCTAAGCCA
AATAAACTAG ATGGCTCCAG TGAGCAAAAA GTGGGTGACT TCTATAACAG CTATATGAAT
ACCGATATTG TAGAGCGGTT AGGTATTGCA CCACTAAGTG AGCAGCTTTC TGATATCTCT
CTGGCGAAAG ATCATGATGA TATTGCCAGT TTAATGGGAG GCCTCTTGCT CAATGGTGTG
CAGATCCCAT TTGGCTTTTA CGTTAATAAT GACGCAAAAA AATCTACTCA GTATGCCGTT
TACCTTTATC AGTCAGGCCT AAGCCTGCCA GATCGTGACT ATTACTTAAA AGATGATGCA
AAGTTTGTGG CTAATAGAGC CGCACTTAAT ACTTATGTCA CCGATATTAT GACTCAAGCA
GGCAGTAAAG ATGCAAAGCG TATCGCTGCT AGTGTTGCGA AAATAGAGCA CTTTATTGCT
AAGAGTCAAT GGAGCCGTGT GGAGTCTCGC GATGCTAATA AGAGTTATAA CAAAATGAAT
AGAGCAGAAC TACAGGCAAG TATGCCTGAG TTTGATTTTG TTCAGTTTGC TGCGAGTGCA
GATATTGGCA AAGTGAAAGA GGTTATTGTT CGTCAAAAAT CCTACTTTGA GGAGTTTGGC
AGGCACTTCA CCGGATTCAC TGTTACTGAA TGGCAGGATT ACCTCTCTTT TCATCTTGTT
GATAGTTATG CCGAGCTATT AAGTCAAAAC TTTGTTGATC TGCATTTTAA TTTTCACAGT
AAAACCCTGA TGGGCATAGA AGCACAGAAG CCACGTTGGA AAAGAGCGGT TGATGCTGCA
GACCAAGTGC TCGGTGAGCT AGTTGGTAAG GAGTATGTAA AGGAACACTT CAAGCCAGAA
GCCAAAGAGA AGATGGAGTC ACTGATCCAA GATCTGATCA AAGGGTTTGA AGTGAGCATT
AATGAACTTG AATGGATGAC GCCTGAAACA AAGGTCGCCG CTCAGGAAAA ACTCTCTAAG
TTCACTTATA AGATAGGTTA CCCAGATAAA TGGAGAGATT ACACCGACCT CCAAATTAAA
CCAGATGAGC TGGTGGGTAA TTATCAGCGT TACGCTAAGT TTGAATATAA CACCATGCTA
GATAAGCTTG GTAAGCCTAT CGATCGCACT GAATGGCATA TGACGCCGCA AACCGTTAAT
GCTTACTATA ATCCGGTAAT GAATGAAATT GTGTTTCCAG CCGCGATTTT ACAGCCTCCC
TTCTTTAATC TTGAAGCGGA TGATGCAATC AACTTTGGTG GTATCGGTGC GGTGATTGGC
CATGAGATAA GTCATGGTTT CGATGATCAA GGCGCTAAGT ATGATGGTGA TGGTAATTTA
CGTAATTGGT GGACAGATGC CGATCGTGAG GAGTTTCAAA AACGTGGTGC TCAACTATCT
GCTCAATACT CTAAATATGA AGCGCTACCA GGTAAACATG TAAATGGTGA TCTGACATTA
GGTGAGAATA TCGGTGATCT TGGAGGCTTA ACGGTTGCAG CACGTTCATA TCACCTAAGC
TTAGATGGTC AAGAAGCACC AGTTATTGAC GGATTAACTG GAGAGCAGAG GCTCTTTATT
GGCTGGTCAC AAGTATGGCG TCGTAACTAT CGTGATGAAG AGCTAAGTCG TCGTTTAATG
ACAGACTCTC ACTCACCTAG TCACTTCCGT GCGATGGGGA CGCCAAGAAA TATTCCTGCA
TTTTATCAAG CCTTCGATTT AAAAGAGGGA GATAAGATGT TCTTAGCTCC AGAAGATCGA
GTAAAGATCT GGTAG
 
Protein sequence
MKRVSKLAIG IALSLGLAAC SSNEPSAPEV QSKSMVSGVE KANFDTSVRH QDDFYYSVNG 
HWLANTPIPD DKSNYGAFSV LYERSQKALK QIIDDAASKP NKLDGSSEQK VGDFYNSYMN
TDIVERLGIA PLSEQLSDIS LAKDHDDIAS LMGGLLLNGV QIPFGFYVNN DAKKSTQYAV
YLYQSGLSLP DRDYYLKDDA KFVANRAALN TYVTDIMTQA GSKDAKRIAA SVAKIEHFIA
KSQWSRVESR DANKSYNKMN RAELQASMPE FDFVQFAASA DIGKVKEVIV RQKSYFEEFG
RHFTGFTVTE WQDYLSFHLV DSYAELLSQN FVDLHFNFHS KTLMGIEAQK PRWKRAVDAA
DQVLGELVGK EYVKEHFKPE AKEKMESLIQ DLIKGFEVSI NELEWMTPET KVAAQEKLSK
FTYKIGYPDK WRDYTDLQIK PDELVGNYQR YAKFEYNTML DKLGKPIDRT EWHMTPQTVN
AYYNPVMNEI VFPAAILQPP FFNLEADDAI NFGGIGAVIG HEISHGFDDQ GAKYDGDGNL
RNWWTDADRE EFQKRGAQLS AQYSKYEALP GKHVNGDLTL GENIGDLGGL TVAARSYHLS
LDGQEAPVID GLTGEQRLFI GWSQVWRRNY RDEELSRRLM TDSHSPSHFR AMGTPRNIPA
FYQAFDLKEG DKMFLAPEDR VKIW