| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0314 |
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| Symbol | |
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| ID | 6114540 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 389109 |
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| End bp | 389552 |
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| Gene Length | 444 bp |
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| Protein Length | 147 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641631798 |
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| Product | general secretion pathway protein |
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| Protein accession | YP_001758710 |
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| Protein GI | 170724684 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4968] Tfp pilus assembly protein PilE |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGGTA TTCAGTTAAG CAAGAAGCTA AACAAGCAAG CTAAGGGTTT CACCCTTATT
GAATTAATGA TCGTTGTTGC AATTATCGGT ATTCTCGCCG CAGTTGCACT GCCTGCTTAT
CGAGATTATA CAGGTTCAGC TCACGGTGGT GCAGCGATGA AGGGATTAGG TGCATTTACT
TCAAAAGCAG TAACTTGCGT GCAATCAGGA AGAGCATGTG ATTCCATCAA CGGTGACACA
GGTCAATTAG CTGGCTCTAC AGCAGTAACG GGGCTTAGTG CAACGGCTGA ATTTGCAGAA
GGTGTAGGTG GAGACATTGC TTTCGACGAA GGGAGCTGTG CAGTTACTGC AACGATCAAT
CCTAATGGGA CTGTAACCTT TGCTGCCGCA TCTTCTGGTA CAGGTGCAGA CGATGCGCAA
TGCCAAGACG GAGCTGGAAT ATAA
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| Protein sequence | MKGIQLSKKL NKQAKGFTLI ELMIVVAIIG ILAAVALPAY RDYTGSAHGG AAMKGLGAFT
SKAVTCVQSG RACDSINGDT GQLAGSTAVT GLSATAEFAE GVGGDIAFDE GSCAVTATIN
PNGTVTFAAA SSGTGADDAQ CQDGAGI
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