| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0303 |
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| Symbol | |
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| ID | 6114529 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 371051 |
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| End bp | 371962 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641631787 |
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| Product | prepilin peptidase |
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| Protein accession | YP_001758699 |
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| Protein GI | 170724673 |
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| COG category | [N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1989] Type II secretory pathway, prepilin signal peptidase PulO and related peptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGAAT TTATCTCCAC TATGAGCCAT AATTTGTGGC TCTTTGCCAT GATTAGTTTT
GTTTTTGCAG CCGTTATCGG CAGCTTTCTC AATGTCGTCA TTCACCGCTT ACCAGTAATG
ATGAAGCGAG AGTGGCAGCA GGAATGCAAC CAATATCTGA ATGAATACCA TGAAGCGCTA
GTTAAGCCTA TTGCTAAAAA ACTAGAAAAG CCAATTGATA GTTATCCTGA AAAATACAAT
TTAGTCATAC CTCATTCAGC ATGCCCAAAA TGCGGCACCC ATATAAAACC TTGGCATAAC
CTTCCTATTC TTGGGTGGTT AATGCTAAAA GGTAAGTGTG CATCATGTAA GACTCATATC
TCAGCCAGAT ACCCTGTTAT AGAGTTATTG ACTGGATTAG CGATTGCTTT TCTGGCGCTT
CATTTTGGCC CAACTATTGA GTTTGCCTTA GCCACAACAT TAACTTTTGG TTTAATCGTC
TTGACTGGAA TTGACCTTGA CGAAATGCTA TTACCAGATC AGATCACCCT TCCCCTACTC
TGGCTAGGGC TTATCATCAA CCTCAACGGC ACTTTTGTTA GCCCAACTGA TGCCATTATT
GGTGCTGCAG CTGGTTACAT GAGTCTCTGG AGTGTATTTT GGGGGTTTAA GCTATTAACA
GGCAAGGAAG GGATGGGTTA TGGCGACTTT AAGCTATTAG CCGTATTCGG TGCTTGGCTG
GGTTGGCAAC TACTCCCCAT AATAGTATTA CTCTCTTCAC TCGTCGGAGC GATTATTGGT
ATTGGATTGA TTGTGACAAA AAAAATCAAT CACACAAACC CTATTCCGTT TGGCCCCTAT
ATCGCTATCG CGGGTTGGAT AGCCATGATA TGGGGCTCAA GTATCAACGC TTGGTACCTC
TCCACCCTTT AG
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| Protein sequence | MSEFISTMSH NLWLFAMISF VFAAVIGSFL NVVIHRLPVM MKREWQQECN QYLNEYHEAL
VKPIAKKLEK PIDSYPEKYN LVIPHSACPK CGTHIKPWHN LPILGWLMLK GKCASCKTHI
SARYPVIELL TGLAIAFLAL HFGPTIEFAL ATTLTFGLIV LTGIDLDEML LPDQITLPLL
WLGLIINLNG TFVSPTDAII GAAAGYMSLW SVFWGFKLLT GKEGMGYGDF KLLAVFGAWL
GWQLLPIIVL LSSLVGAIIG IGLIVTKKIN HTNPIPFGPY IAIAGWIAMI WGSSINAWYL
STL
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