Gene Swoo_0282 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0282 
Symbol 
ID6114505 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp341911 
End bp342375 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content41% 
IMG OID641631763 
Productprotein of unknown function Spy-related 
Protein accessionYP_001758678 
Protein GI170724652 
COG category[T] Signal transduction mechanisms
[N] Cell motility
[P] Inorganic ion transport and metabolism
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3678] P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.26692e-08 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value2.42912e-08 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGAAAAAGA ATACTTTAAA GGCTGGGCTG CTTGCCATAG TAGCAAGTAC GACATTAATG 
GCATCGTCGG TCTATGCTGG AGATGATCAT CAACATCATG GAAAATCTCA CCATATGAAA
GGTGAGCGTT CAGGTCATCA CGGTGATATC CGCAAGATGT TTAGAGGGTT AGATCTTACT
GATACCCAAA AAGCAGAGAT AAAGGCTTTA GTCAAAGAGC AAAGAAAAGC AATGAAAGAG
GAGCAAGTAT CTAAAGAGGA GCGTTCAGCG CACCGCTCTG AATTTTTTGC TCTCATCAGT
GCTGACAATT TTGATGAAGC CAAGGCTCAA GCATTGATCG AGAAGAAACA GCAGAAGCGA
CAGGAAAAAG GAGTGGCTAT GCTGAAAATT CAAAATGAAG TTTATCAACT CTTAACACCT
GAGCAAAAGG TGAAGTTTAA AGAGAAGTTT GAAAGGAGAC ATTAG
 
Protein sequence
MKKNTLKAGL LAIVASTTLM ASSVYAGDDH QHHGKSHHMK GERSGHHGDI RKMFRGLDLT 
DTQKAEIKAL VKEQRKAMKE EQVSKEERSA HRSEFFALIS ADNFDEAKAQ ALIEKKQQKR
QEKGVAMLKI QNEVYQLLTP EQKVKFKEKF ERRH