Gene Swoo_0279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0279 
Symbol 
ID6114502 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp338978 
End bp339646 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content43% 
IMG OID641631760 
ProductTetR family transcriptional regulator 
Protein accessionYP_001758675 
Protein GI170724649 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.350213 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value1.98081e-08 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGAGCAGTT GGAAACAGCG GGAACAGTAC TTAGTGCAAG TCGCTCAACG TTGCCTTCAG 
GGGCATAAAA CTTTCGATCT TTATCGCTCG CATTTAGTTA ACGCCAGTCA AATTTCGAAG
GGGACTATCT ATAATCATTT TACGACAGAG GCAGATTTAA TCCTCGCTGT TTCCTGTTGT
GAATATGAGT ATTGGCTTGG GTTGGCAAAG CAAGATCTTA AGGAGCATCA AGATCCATTA
ACGTGCTTTT TGTATCATCA CTGTAACCGC CTATATTACA CCTTGTCAGA GAAGCGATTT
GTCGTTGACA GGGTCATGCC AAACCAAGAT CTGCTTAATC AAGCGAATGA GTTACTTCGC
CTGCGCTTTG AGACGCTATA TGAGGAGTAC GTAAGTTTGA ATAAGCGTAT GATCTTGGAT
ATTGGAGAGG TGGCTGGTTT TGATAGAGTC GAGCTGGTTA TGAATTACTT ACGAGGTGCG
ATGATTAATA GTGATGATGC TGATAAACAT TTTGGCGATG TGCAACTTTA CTATCAATTC
AGTTATGCAT TGAGCCAGTT AATGGGACAC TCCGATAGGA GGATCCCCAC TAAACTGGCA
TTCGCTGCTT GGTTGTCTGC CAAGCATAGA GAGAAGCATC AAGTAACCAT AATCAACTCG
GCAGCTTAA
 
Protein sequence
MSSWKQREQY LVQVAQRCLQ GHKTFDLYRS HLVNASQISK GTIYNHFTTE ADLILAVSCC 
EYEYWLGLAK QDLKEHQDPL TCFLYHHCNR LYYTLSEKRF VVDRVMPNQD LLNQANELLR
LRFETLYEEY VSLNKRMILD IGEVAGFDRV ELVMNYLRGA MINSDDADKH FGDVQLYYQF
SYALSQLMGH SDRRIPTKLA FAAWLSAKHR EKHQVTIINS AA